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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
caQTL
1
candidate regulatory elements
1
chromatin state
1
eQTL
1
gene expression
Annotation Category
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
1
RNA-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
3
in vitro differentiated cells
2
primary cell
Biosample term
27
common myeloid progenitor, CD34-positive
14
B cell
14
CD4-positive, alpha-beta memory T cell
11
foreskin keratinocyte
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
7
CD8-positive, alpha-beta T cell
7
T-helper 1 cell
7
macrophage
7
mononuclear cell
7
natural killer cell
7
neurosphere
7
regulatory T cell
7
trophoblast cell
6
T cell
6
T-helper 17 cell
6
T-helper 2 cell
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
fibroblast of lung
6
foreskin fibroblast
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
neutrophil
4
T-cell
4
bronchial epithelial cell
4
epithelial cell of prostate
4
fibroblast of breast
4
fibroblast of dermis
4
foreskin melanocyte
4
monocyte
4
myoepithelial cell of mammary gland
4
peripheral blood mononuclear cell
4
skeletal muscle myoblast
3
blood cell
3
cardiac fibroblast
3
fibroblast of cardiac tissue
3
keratinocyte
3
kidney tubule cell
3
lung microvascular endothelial cell
3
mammary epithelial cell
3
mammary gland epithelial cell
3
naive T cell
2
CD1c-positive myeloid dendritic cell
2
articular chondrocyte
2
astrocyte
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
astrocyte of the spinal cord
2
brain microvascular endothelial cell
2
cardiac muscle cell
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
fibroblast
2
fibroblast of gingiva
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
iris pigment epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
mesenchymal stem cell
2
non-pigmented ciliary epithelial cell
2
osteoblast
2
pulmonary artery endothelial cell
2
renal cortical epithelial cell
2
retinal pigment epithelial cell
2
skeletal muscle cell
2
skeletal muscle satellite cell
2
skin fibroblast
2
smooth muscle cell of the brain vasculature
2
stromal cell of bone marrow
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Leydig cell
1
T follicular helper cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
amnion mesenchymal stem cell
1
amniotic epithelial cell
1
amniotic stem cell
1
brain pericyte
1
effector memory CD4-positive, alpha-beta T cell
1
endothelial cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
fat cell
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
helper T cell
1
hepatic stellate cell
1
hepatocyte
1
kidney capillary endothelial cell
1
luminal epithelial cell of mammary gland
1
mammary stem cell
1
microglial cell
1
naive B cel
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
pericyte cell
1
progenitor cell
1
regular cardiac myocyte
1
sensory neuron
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
2
connective tissue
Life stage
1
adult
Date released
1
February, 2021
1
February, 2024
Software used
1
encode-ccres
1
qTLtools
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
RFA
1
AMP
1
AMP2
Showing 2 of 2 results
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Download
FileSet
DSR627LDJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR033HJN
released
Annotation file set
: Expression QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP