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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
Annotation Category
3
Genetic variant effects
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
105
monocyte
42
CD8-positive, alpha-beta T cell
40
common myeloid progenitor, CD34-positive
28
B cell
23
CD4-positive, alpha-beta memory T cell
18
endothelial cell
17
fibroblast
15
CD8-positive, alpha-beta memory T cell
15
endothelial cell of umbilical vein
15
foreskin keratinocyte
15
hepatocyte
15
regulatory T cell
14
T cell
14
foreskin fibroblast
14
mononuclear cell
13
natural killer cell
13
osteoblast
13
trophoblast cell
12
CD14-positive monocyte
12
CD4-positive, alpha-beta T cell
12
T-helper 1 cell
12
astrocyte
12
endothelial cell of hepatic sinusoid
12
excitatory neuron
12
fibroblast of lung
12
macrophage
12
mammary epithelial cell
12
pericyte cell
12
skeletal muscle myoblast
11
keratinocyte
10
T-helper 17 cell
10
T-helper 2 cell
10
bronchial epithelial cell
10
neurosphere
9
erythroblast
9
mature neutrophil
9
pancreatic ductal cell
9
retinal pigment epithelial cell
9
skeletal muscle satellite cell
9
smooth muscle cell
8
dermis blood vessel endothelial cell
8
fibroblast of cardiac tissue
8
fibroblast of dermis
8
mammary gland epithelial cell
8
pancreatic beta cell
7
fibroblast of mammary gland
7
fibroblast of pulmonary artery
7
fibroblast of villous mesenchyme
7
kidney tubule cell
7
pancreatic alpha cell
6
CD1c-positive myeloid dendritic cell
6
epithelial cell of prostate
6
fibroblast of breast
6
glutamatergic neuron
6
hepatic stellate cell
6
myoepithelial cell of mammary gland
6
naive T cell
6
neutrophil
6
pancreatic acinar cell
6
peripheral blood mononuclear cell
6
pulmonary artery endothelial cell
6
skin fibroblast
5
CD14-positive, CD16-negative classical monocyte
5
choroid plexus epithelial cell
5
epithelial cell of proximal tubule
5
foreskin melanocyte
5
glomerular endothelial cell
5
glomerular visceral epithelial cell
5
inhibitory neuron
5
kidney glomerular epithelial cell
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
pancreatic delta cell
5
renal cortical epithelial cell
5
skeletal muscle fiber
5
tracheal epithelial cell
4
T-cell
4
acute myeloid leukemia cell
4
alternatively activated macrophage
4
aortic adventitial fibroblast
4
aortic endothelial cell
4
astrocyte of the cerebellum
4
astrocyte of the hippocampus
4
brain microvascular endothelial cell
4
cardiac fibroblast
4
cardiac muscle cell
4
dermis lymphatic vessel endothelial cell
4
fibroblast of peridontal ligament
4
iris pigment epithelial cell
4
kidney epithelial cell
4
luminal epithelial cell of mammary gland
4
lung microvascular endothelial cell
4
memory B cell
4
mesenchymal stem cell
4
non-pigmented ciliary epithelial cell
4
plasma cell
4
preadipocyte
4
renal epithelial cell
4
skeletal muscle cell
4
smooth muscle cell of the brain vasculature
4
type II pneumocyte
3
cardiac fibroblast
3
Ishikawa
3
Th1 cell
3
Th17 cell
3
astrocyte of the spinal cord
3
bone marrow cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
epithelial cell of esophagus
3
erythroid cell
3
fibroblast of gingiva
3
fibroblast of the aortic adventitia
3
fibroblast of the conjunctiva
3
gabaergic neuron
3
inflammatory macrophage
3
kidney capillary endothelial cell
3
mast cell
3
mononuclear cell of bone marrow
3
myotube
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neoplastic cell
3
peripheral blood stem cell
3
pre-B acute lymphoblastic leukemia cell
3
pulmonary interstitial fibroblast
3
stromal cell of bone marrow
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
Adipose stromal cell
2
B-lymphocyte
2
CD34-positive, CD38-negative hematopoietic stem cell
2
Muller cell
2
Rhabdoid Tumor of the Kidney
2
T follicular helper cell
2
Th2 cell
2
adipocyte
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
basal cell
2
blood vessel smooth muscle cell
2
brain pericyte
2
capillary endothelial cell
2
cardiac muscle myoblast
2
central memory CD8-positive, alpha-beta T cell
2
chronic lymphocytic leukemia cell
2
ciliated cell
2
club cell
2
columnar chondrocyte
2
dermis microvascular lymphatic vessel endothelial cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
enteric neuron
2
enteric smooth muscle cell
2
epidermal melanocyte
2
epithelial cell of amnion
2
erythroid progenitor cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
gamma-delta T cell
2
glial cell
2
head and neck squamous cell carcinoma
2
leukemic stem cell
2
leukocyte
2
mammary stem cell
2
mantle cell lymphoma cell
2
mature natural killer cell
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
meso-epithelial cell
2
mesothelial cell
2
myofibroblast cell
2
naive regulatory T cell
2
neuron
2
neuronal stem cell
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
peripheral blood-derived erythroblast
2
plasmacytoid dendritic cell
2
primordial germ cell
2
prostate gland cancer cell
2
regular cardiac myocyte
2
renal proximal tubule cell
2
schwann cell
2
small cell ovarian carcinoma cell
2
smooth muscle cell of the esophagus
2
somatic muscle myotube
1
B-Lymphocytes
1
B-cell lymphoma cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
Date released
1
April, 2020
1
February, 2021
Software used
1
macs
Lab
1
AMP-T2D consortium
1
Xin Sun, UCSD
Project
1
AMP
1
LungMap
RFA
1
AMP
1
LungMap2
biosample_term_name!
epithelial cell of esophagus
Showing 2 of 2 results
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Download
FileSet
DSR368DGC
released
Annotation file set
: ATAC-seq peaks in myofibroblast from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR010NOT
released
Annotation file set
: Binding sites annotation for Muscle Myofibroblasts from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP