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Citing CMDGA
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Annotation type
2
gene expression
2
variant allelic effects
Annotation Category
2
Gene expression levels
2
Genetic variant effects
Annotation type Category
2
snATAC-seq
2
snDropSeq
Available data
2
bed bed3+
2
tsv
2
txt
File set status
4
released
Genome assembly (visualization)
2
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
20
endothelial cell of umbilical vein
16
endothelial cell of hepatic sinusoid
10
dermis blood vessel endothelial cell
8
fibroblast of pulmonary artery
7
choroid plexus epithelial cell
7
pulmonary artery endothelial cell
6
dermis lymphatic vessel endothelial cell
6
smooth muscle cell of the brain vasculature
5
cardiac fibroblast
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Glomerular Capillary Endothelial Cell
5
Lymphatic Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
brain microvascular endothelial cell
5
fibroblast of the aortic adventitia
5
kidney capillary endothelial cell
5
lung microvascular endothelial cell
4
aortic endothelial cell
4
endothelial cell of lymphatic vessel
4
pancreatic endothelial cell
4
vascular associated smooth muscle cell
3
smooth muscle cell of the coronary artery
2
capillary endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
endothelial cell of coronary artery
1
brain microvascular endothelial cell
1
aortic smooth muscle cell
1
cardiac fibroblast
1
placental villus capillary endothelial cell
Organ
4
vasculature
Life stage
2
adult
Date released
2
February, 2021
2
February, 2024
Software used
2
deltasvm
2
r
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
Project
4
AMP
RFA
4
AMP
biosample_term_name!
adipocyte
Showing 4 of 4 results
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FileSet
DSR612XXH
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of kidney Vascular Smooth Muscle Cells and pericytes from GSE121862 snDropSeq kidney regions (medulla)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR033OJN
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of kidney Vascular Smooth Muscle Cells and pericytes from GSE121862 snDropSeq kidney regions (cortex)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR963XVP
released
Annotation file set
: Variant allelic effects annotation of Vascular smooth muscle cells (sub-type2) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR265TNH
released
Annotation file set
: Variant allelic effects annotation of Vascular smooth muscle cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP