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Schema
Citing CMDGA
Clear Filters
Annotation type
2
gene expression
1
eQTL
Annotation Category
2
Gene expression levels
1
Genetic variant effects
Annotation type Category
2
scRNA-seq
1
RNA-seq
Available data
2
tsv
1
txt
File set status
3
released
Genome assembly (visualization)
hg19
4
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
0
stem cell
Biosample term
19
monocyte
16
epithelial cell of proximal tubule
15
glomerular endothelial cell
13
hepatocyte
10
macrophage
9
endothelial cell
9
regulatory T cell
8
T-helper 1 cell
8
T-helper 17 cell
7
kidney loop of Henle thin ascending limb epithelial cell
6
kidney interstitial cell
6
pancreatic acinar cell
6
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic delta cell
6
pancreatic ductal cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
pancreatic stellate cell
4
T-helper 2 cell
4
endothelial cell of hepatic sinusoid
4
gamma-delta T cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
3
CD8-positive, alpha-beta T cell
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
S-shaped body
3
T follicular helper cell
3
adult endothelial progenitor cell
3
blood cell
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
memory B cell
3
naive B cel
3
natural killer cell
3
pancreatic quiescent stellate cell
2
B cell
2
CD4-positive helper T cell
2
Kupffer cell
2
T cell
2
articular chondrocyte
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
fibroblast
2
hepatic stellate cell
2
kidney glomerular epithelial cell
2
kidney inner medulla collecting duct intercalated cell
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
osteoblast
2
pancreatic polypeptide-secreting cell
2
renal vesicle
2
skeletal muscle myoblast
2
smooth muscle cell of the coronary artery
2
vascular associated smooth muscle cell
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Leydig cell
1
Schwann cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
activated pancreatic stellate cell
1
alpha-beta T cell
1
alternatively activated macrophage
1
astrocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cholangiocyte
1
cytotoxic T cell
1
dendritic cell
1
effector CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
endothelial cell of coronary artery
1
endothelial cell of umbilical vein
1
epithelial cell of distal tubule
1
erythroid lineage cell
1
fat cell
1
fibroblast of the aortic adventitia
1
helper T cell
1
inflammatory macrophage
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney tubule cell
1
leukocyte
1
mast cell
1
mature B cell
1
mesenchymal cell
1
mesenchymal stem cell of adipose
1
meso-epithelial cell
1
microglial cell
1
myeloid dendritic cell
1
naive B cell
1
naive regulatory T cell
1
neutrophil
1
pancreatic cell
1
pancreatic epsilon cell
1
pericardium fibroblast
1
plasma cell
1
proximal tubule
1
quiescent pancreatic stellate cell
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal connecting tubule
1
renal cortical epithelial cell
1
renal principal cell
1
sensory neuron
1
skeletal muscle satellite cell
1
ureteric bud
Life stage
2
adult
Date released
1
August, 2021
1
February, 2021
1
January, 2022
Software used
2
r
1
qTLtools
1
seurat
Lab
2
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
3
AMP
RFA
2
AMP
1
AMP2
assembly!
hg19
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR224LMM
released
Annotation file set
: NK-cell naive eQTL of studay Schmiedel_2018 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR962TNF
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for natural killer cell
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR725TSR
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of liver NK-likecells from GSE115469 scRNA-seq
Lab:
AMP-T2D consortium
Project:
AMP