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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
0
primary cell
Biosample term
110
monocyte
61
HeLa-S3
46
CD8-positive, alpha-beta T cell
44
A549
44
H1-hESC
41
common myeloid progenitor, CD34-positive
35
K562
30
B cell
30
endothelial cell
28
fibroblast
27
CD14-positive monocyte
23
CD4-positive, alpha-beta memory T cell
23
macrophage
21
MCF-7
21
pericyte cell
20
breast cancer cell
19
HFFc6
19
hepatocyte
19
keratinocyte
19
smooth muscle cell
17
foreskin fibroblast
16
HepG2
16
T cell
16
regulatory T cell
15
CD8-positive, alpha-beta memory T cell
15
GM12878
15
H9
15
foreskin keratinocyte
15
natural killer cell
14
astrocyte
14
endothelial cell of umbilical vein
14
mononuclear cell
14
trophoblast cell
13
fibroblast of cardiac tissue
13
osteoblast
12
CD4-positive, alpha-beta T cell
12
EndoC_BH1
12
T-helper 1 cell
12
fibroblast of lung
12
mammary epithelial cell
12
neuroblastoma cell
12
pancreatic beta cell
11
endothelial cell of hepatic sinusoid
11
excitatory neuron
11
pancreatic ductal cell
10
Rhabdomyosarcoma
10
bronchial epithelial cell
10
gastric cancer cell
10
pancreatic alpha cell
10
skeletal muscle myoblast
9
T-helper 17 cell
9
T-helper 2 cell
9
cardiac muscle cell
9
epithelial cell of prostate
9
erythroblast
9
fibroblast of dermis
9
liposarcoma
9
lymphocyte
9
neurosphere
9
pancreatic acinar cell
9
pancreatic delta cell
9
skeletal muscle satellite cell
8
22Rv1
8
B-lymphoblastoid cell line
8
HEK293
8
IMR-90
8
SK-N-SH
8
choroid plexus epithelial cell
8
fibroblast cell line
8
mammary gland epithelial cell
8
pituitary stalk
7
GM06990
7
GM12864
7
GM12865
7
GM19240
7
HAP-1
7
HL-60
7
HT-29
7
Jurkat
7
MM.1S
7
NAMALWA cell
7
OCI-LY7
7
PC-9
7
SK-N-DZ
7
SK-N-MC
7
kidney tubule cell
7
naive thymus-derived CD4-positive, alpha-beta T cell
7
neutrophil
7
retinal pigment epithelial cell
7
skin fibroblast
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
GM12875
6
GM19238
6
GM19239
6
GM23248
6
HUES8
6
KARPAS-422 cell
6
LHCN-M2
6
LNCAP
6
LoVo cell
6
MG63
6
NT2-D1 cell
6
PC-3
6
RPMI8226
6
RWPE1
6
Rh-4 cell
6
SW480
6
WERI-Rb-1
6
colon epithelial cell
6
diffuse intrinsic pontine glioma
6
endometrium adenocarcinoma
6
fibroblast of pulmonary artery
6
immortal human breast epithelial cell line cell
5
cardiac fibroblast
5
CD4-positive helper T cell
5
Chondroid Chordoma
5
CyT49
5
Daoy
5
Ewing sarcoma
5
GM08714
5
GM10248
5
GM10266
5
GM12891
5
GM12892
5
GM18507
5
H7-hESC
5
HCT-116 cell
5
HCT116
5
HUES6
5
HuH-7
5
KBM-7
5
LNCaP clone FGC
5
OCI-LY1
5
SJSA1
5
T47D
5
WI38
5
acute myeloid leukemia
5
dermis blood vessel endothelial cell
5
enterocyte
5
esophageal adenocarcinoma
5
glomerular visceral epithelial cell
5
glutamatergic neuron
5
hepatic stellate cell
5
lymphoblastoid cell line
5
myoepithelial cell of mammary gland
5
prostate cancer cell line
5
skeletal muscle fiber
5
smooth muscle cell of the coronary artery
5
type I muscle cell
4
A172
4
A673
4
ACHN
4
B-lymphocyte
4
COLO205
4
Caki2
4
GM04503
4
GM04504
4
GM12873
4
GM18505
4
GM19099
4
GM19193
4
H4
4
HAC cell
4
HBMEC cell
4
HK-2 cell
4
HS-SY-2 cell
4
HUES64
4
Ishikawa
4
L1-S8
4
M059J
4
MDA-MB-231 cell
4
Mantle cell lymphoma
4
NB4
4
NCCIT cell
4
NHEK
4
Normal Human Astrocytes
4
OCI-LY3
4
PANC-1 cell
4
Panc1
4
RCC 7860
4
RKO
4
RPMI7951
4
RS4-11 cell
4
SJCRH30
4
SK-N-SH_RA
4
T-cell
4
U937
4
VCaP cell
4
acute myeloid leukemia cell
4
aortic endothelial cell
4
cortical cell of adrenal gland
Organ
3
skin of body
Life stage
3
adult
Date released
2
September, 2022
1
February, 2021
Software used
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR047AYQ
released
Annotation file set
: Candidate regulatory elements for BSS00735 iPS-11a from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR278DIC
released
Annotation file set
: Target gene predictions for BSS00735 iPS-11a from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR859OFU
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE iPS-11a
Lab:
AMP-T2D consortium
Project:
AMP