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Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
Annotation Category
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
105
monocyte
42
CD8-positive, alpha-beta T cell
18
endothelial cell
17
fibroblast
14
common myeloid progenitor, CD34-positive
13
hepatocyte
12
B cell
12
CD4-positive, alpha-beta T cell
12
endothelial cell of hepatic sinusoid
12
excitatory neuron
12
foreskin fibroblast
12
macrophage
12
mammary epithelial cell
11
endothelial cell of umbilical vein
11
osteoblast
10
astrocyte
10
pericyte cell
9
erythroblast
9
mature neutrophil
9
pancreatic ductal cell
9
regulatory T cell
9
smooth muscle cell
8
skeletal muscle myoblast
7
foreskin keratinocyte
7
keratinocyte
7
natural killer cell
7
pancreatic beta cell
7
retinal pigment epithelial cell
7
skeletal muscle satellite cell
6
T cell
6
T-helper 1 cell
6
bronchial epithelial cell
6
fibroblast of lung
6
glutamatergic neuron
6
pancreatic acinar cell
6
pancreatic alpha cell
6
peripheral blood mononuclear cell
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive, alpha-beta memory T cell
5
fibroblast of mammary gland
5
fibroblast of pulmonary artery
5
fibroblast of villous mesenchyme
5
inhibitory neuron
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
skeletal muscle fiber
5
tracheal epithelial cell
5
trophoblast cell
4
CD14-positive monocyte
4
CD1c-positive myeloid dendritic cell
4
T-cell
4
T-helper 17 cell
4
T-helper 2 cell
4
acute myeloid leukemia cell
4
alternatively activated macrophage
4
aortic adventitial fibroblast
4
cardiac fibroblast
4
cardiac muscle cell
4
dermis blood vessel endothelial cell
4
hepatic stellate cell
4
memory B cell
4
mesenchymal stem cell
4
neurosphere
4
pancreatic delta cell
4
plasma cell
4
preadipocyte
4
pulmonary artery endothelial cell
4
renal epithelial cell
4
type II pneumocyte
3
cardiac fibroblast
3
Ishikawa
3
Th1 cell
3
Th17 cell
3
bone marrow cell
3
choroid plexus epithelial cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
epithelial cell of proximal tubule
3
erythroid cell
3
foreskin melanocyte
3
gabaergic neuron
3
glomerular endothelial cell
3
glomerular visceral epithelial cell
3
inflammatory macrophage
3
kidney glomerular epithelial cell
3
kidney tubule cell
3
mast cell
3
mononuclear cell of bone marrow
3
myotube
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neoplastic cell
3
peripheral blood stem cell
3
pre-B acute lymphoblastic leukemia cell
3
pulmonary interstitial fibroblast
3
renal cortical epithelial cell
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
Adipose stromal cell
2
B-lymphocyte
2
CD34-positive, CD38-negative hematopoietic stem cell
2
Muller cell
2
Rhabdoid Tumor of the Kidney
2
T follicular helper cell
2
Th2 cell
2
adipocyte
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
basal cell
2
blood vessel smooth muscle cell
2
brain microvascular endothelial cell
2
brain pericyte
2
capillary endothelial cell
2
cardiac muscle myoblast
2
central memory CD8-positive, alpha-beta T cell
2
chronic lymphocytic leukemia cell
2
ciliated cell
2
club cell
2
columnar chondrocyte
2
dermis microvascular lymphatic vessel endothelial cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
enteric neuron
2
enteric smooth muscle cell
2
epithelial cell of prostate
2
erythroid progenitor cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
fibroblast of breast
2
fibroblast of cardiac tissue
2
fibroblast of dermis
2
fibroblast of peridontal ligament
2
gamma-delta T cell
2
glial cell
2
head and neck squamous cell carcinoma
2
iris pigment epithelial cell
2
kidney epithelial cell
2
leukemic stem cell
2
leukocyte
2
luminal epithelial cell of mammary gland
2
lung microvascular endothelial cell
2
mammary gland epithelial cell
2
mantle cell lymphoma cell
2
mature natural killer cell
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
meso-epithelial cell
2
mesothelial cell
2
mononuclear cell
2
myoepithelial cell of mammary gland
2
myofibroblast cell
2
naive regulatory T cell
2
neuron
2
neuronal stem cell
2
neutrophil
2
non-pigmented ciliary epithelial cell
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
peripheral blood-derived erythroblast
2
plasmacytoid dendritic cell
2
primordial germ cell
2
prostate gland cancer cell
2
renal proximal tubule cell
2
schwann cell
2
skeletal muscle cell
2
skin fibroblast
2
small cell ovarian carcinoma cell
2
smooth muscle cell of the brain vasculature
2
smooth muscle cell of the esophagus
2
somatic muscle myotube
1
B-Lymphocytes
1
B-cell lymphoma cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-Positive T-Lymphocytes
1
CD4-positive helper T cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD8-positive, alpha-beta memory T cell
1
Glioblastoma
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
acute myeloid leukemia
1
alveolar cell type II
1
alveolar macrophage
1
amniotic epithelial cell
1
aortic endothelial cell
1
aortic smooth muscle cell
1
astrocyte of the spinal cord
1
basal cell of epidermis
Organ
1
blood vessel
1
connective tissue
1
vasculature
Life stage
1
unknown
Date released
September, 2022
1
February, 2021
Software used
1
encode-ccres
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
month_released!
September, 2022
Showing 1 of 1 results
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Download
FileSet
DSR761GFE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE fibroblast of the aortic adventitia
Lab:
AMP-T2D consortium
Project:
AMP