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Citing CMDGA
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Annotation type
4
accessible chromatin
3
differential activity
3
gene expression
2
target gene predictions
1
variant allelic effects
Annotation Category
2
Target gene links
Annotation type Category
2
snATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
6
olfactory receptor cell
3
pancreatic alpha cell
3
pancreatic beta cell
2
CD4-positive, alpha-beta T cell
2
CD8-positive, alpha-beta T cell
2
activated CD4-positive, alpha-beta T cell
2
macrophage
2
megakaryocyte
2
monocyte
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
pancreatic delta cell
1
B cell
1
activated CD8-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
cell
1
conventional dendritic cell
1
endothelial cell
1
endothelial cell of umbilical vein
1
erythroblast
1
inflammatory macrophage
1
memory B cell
1
natural killer cell
1
natural killer cell mediated cytotoxicity
1
neutrophil
1
non-classical monocyte
1
pancreatic acinar cell
1
pancreatic ductal cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
plasmacytoid dendritic cell
1
regulatory T cell
1
stellate neuron
Organ
2
epithelium
2
pancreas
Date released
2
January, 2021
September, 2022
Software used
2
cicero
abc
Lab
2
Kyle Gaulton, UCSD
Project
2
T1D
RFA
2
T1D
month_released!
September, 2022
software_used.software.name!
abc
Showing 2 of 2 results
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Download
FileSet
DSR078DAN
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of SSTlow_delta
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR092ALL
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of SSThigh_delta
Lab:
Kyle Gaulton, UCSD
Project:
T1D