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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
39
common myeloid progenitor, CD34-positive
27
CD4-positive, alpha-beta memory T cell
24
B cell
21
CD8-positive, alpha-beta memory T cell
18
mononuclear cell
13
trophoblast cell
12
CD14-positive monocyte
12
T cell
12
foreskin keratinocyte
11
regulatory T cell
10
T-helper 1 cell
9
T-helper 17 cell
9
T-helper 2 cell
9
fibroblast of cardiac tissue
9
fibroblast of dermis
9
fibroblast of lung
9
mammary gland epithelial cell
9
naive T cell
9
natural killer cell
9
neurosphere
7
bronchial epithelial cell
7
endothelial cell of umbilical vein
7
kidney tubule cell
7
skeletal muscle myoblast
7
skin fibroblast
6
dermis blood vessel endothelial cell
6
dermis lymphatic vessel endothelial cell
6
epithelial cell of prostate
6
fibroblast of breast
6
keratinocyte
6
myoepithelial cell of mammary gland
6
neutrophil
5
osteoblast
4
CD1c-positive myeloid dendritic cell
4
fibroblast of mammary gland
4
fibroblast of peridontal ligament
4
fibroblast of pulmonary artery
4
fibroblast of villous mesenchyme
4
foreskin fibroblast
4
glomerular endothelial cell
4
glomerular visceral epithelial cell
4
hepatic stellate cell
4
hepatocyte
4
iris pigment epithelial cell
4
kidney glomerular epithelial cell
4
non-pigmented ciliary epithelial cell
4
pulmonary artery endothelial cell
4
renal cortical epithelial cell
4
retinal pigment epithelial cell
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
aortic endothelial cell
3
astrocyte
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
astrocyte of the spinal cord
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
epidermal melanocyte
3
epithelial cell of amnion
3
epithelial cell of esophagus
3
epithelial cell of proximal tubule
3
fibroblast of gingiva
3
fibroblast of the aortic adventitia
3
fibroblast of the conjunctiva
3
foreskin melanocyte
3
kidney capillary endothelial cell
3
kidney epithelial cell
3
luminal epithelial cell of mammary gland
3
lung microvascular endothelial cell
3
mammary stem cell
3
pericyte cell
3
regular cardiac myocyte
3
skeletal muscle cell
3
skeletal muscle satellite cell
3
smooth muscle cell of the brain vasculature
3
stromal cell of bone marrow
2
acute myeloid leukemia cell
2
bone marrow cell
2
monocyte
2
pancreatic delta cell
1
B-Lymphocytes
1
B-lymphocyte
1
CD4-Positive T-Lymphocytes
1
Glioblastoma
1
Ishikawa
1
Th1 cell
1
Th17 cell
1
Th2 cell
1
aortic adventitial fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
erythroid cell
1
mammary epithelial cell
1
neoplastic cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic ductal cell
1
peripheral blood stem cell
1
primordial germ cell
1
pulmonary interstitial fibroblast
1
renal epithelial cell
1
somatic gonadal cell
1
tracheal epithelial cell
Organ
4
connective tissue
Life stage
3
unknown
Date released
3
September, 2022
1
February, 2021
1
June, 2020
Software used
2
r
1
chromhmm
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR197PKJ
released
Annotation file set
: Candidate regulatory elements for BSS00344 fibroblast of peridontal ligament from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR299QOE
released
Annotation file set
: Target gene predictions for BSS00344 fibroblast of peridontal ligament from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR210JRU
released
Annotation file set
: Chromatin states for BSS00344 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR585DKC
released
Annotation file set
: Accessible chromatin annotation for Others HPdLF from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP