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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bam
1
bed bed3+
1
bed gappedPeak
1
xls
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
39
common myeloid progenitor, CD34-positive
27
CD4-positive, alpha-beta memory T cell
24
B cell
21
CD8-positive, alpha-beta memory T cell
18
mononuclear cell
12
CD14-positive monocyte
12
T cell
12
foreskin keratinocyte
12
trophoblast cell
9
T-helper 1 cell
9
T-helper 17 cell
9
T-helper 2 cell
9
fibroblast of cardiac tissue
9
fibroblast of dermis
9
fibroblast of lung
9
mammary gland epithelial cell
9
naive T cell
9
natural killer cell
9
neurosphere
9
regulatory T cell
6
bronchial epithelial cell
6
dermis blood vessel endothelial cell
6
dermis lymphatic vessel endothelial cell
6
endothelial cell of umbilical vein
6
epithelial cell of prostate
6
fibroblast of breast
6
keratinocyte
6
kidney tubule cell
6
myoepithelial cell of mammary gland
6
neutrophil
6
skeletal muscle myoblast
6
skin fibroblast
3
CD1c-positive myeloid dendritic cell
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
aortic endothelial cell
3
astrocyte
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
astrocyte of the spinal cord
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
epidermal melanocyte
3
epithelial cell of amnion
3
epithelial cell of esophagus
3
epithelial cell of proximal tubule
3
fibroblast of gingiva
3
fibroblast of mammary gland
3
fibroblast of peridontal ligament
3
fibroblast of pulmonary artery
3
fibroblast of the aortic adventitia
3
fibroblast of the conjunctiva
3
fibroblast of villous mesenchyme
3
foreskin fibroblast
3
foreskin melanocyte
3
glomerular endothelial cell
3
glomerular visceral epithelial cell
3
hepatic stellate cell
3
hepatocyte
3
iris pigment epithelial cell
3
kidney capillary endothelial cell
3
kidney epithelial cell
3
kidney glomerular epithelial cell
3
luminal epithelial cell of mammary gland
3
lung microvascular endothelial cell
3
mammary stem cell
3
non-pigmented ciliary epithelial cell
3
osteoblast
3
pericyte cell
3
pulmonary artery endothelial cell
3
regular cardiac myocyte
3
renal cortical epithelial cell
3
retinal pigment epithelial cell
3
skeletal muscle cell
3
skeletal muscle satellite cell
3
smooth muscle cell of the brain vasculature
3
stromal cell of bone marrow
2
pancreatic delta cell
1
pancreatic alpha cell
1
pancreatic beta cell
Organ
1
epithelium
1
pancreas
Life stage
1
unknown
Date released
4
January, 2021
4
March, 2023
2
February, 2021
2
November, 2021
1
August, 2018
1
February, 2024
1
May, 2021
1
October, 2019
1
September, 2022
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
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Download
FileSet
DSR938VDA
released
Annotation file set
: Accessible chromatin from snATAC-seq of alpha cells from human pancreatic islet samples
Lab:
AMP-T2D consortium
Project:
AMP