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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
snATAC-seq
1
ATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
128
monocyte
54
common myeloid progenitor, CD34-positive
47
CD8-positive, alpha-beta T cell
36
B cell
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
31
hepatocyte
26
regulatory T cell
23
T-helper 1 cell
23
epithelial cell of proximal tubule
22
CD8-positive, alpha-beta memory T cell
21
T-helper 17 cell
21
glomerular endothelial cell
20
endothelial cell
20
endothelial cell of umbilical vein
20
mononuclear cell
19
foreskin keratinocyte
18
natural killer cell
17
T-helper 2 cell
17
osteoblast
16
fibroblast of lung
16
foreskin fibroblast
16
skeletal muscle myoblast
15
neutrophil
14
CD4-positive, alpha-beta T cell
14
T cell
14
endothelial cell of hepatic sinusoid
14
keratinocyte
13
mammary epithelial cell
13
neurosphere
13
pancreatic ductal cell
12
bronchial epithelial cell
12
fibroblast of dermis
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
pericyte cell
11
glomerular visceral epithelial cell
11
macrophage
11
mammary gland epithelial cell
10
astrocyte
10
dermis blood vessel endothelial cell
10
fibroblast of cardiac tissue
10
kidney tubule cell
9
epithelial cell of prostate
9
mature neutrophil
9
naive T cell
9
pancreatic acinar cell
9
retinal pigment epithelial cell
8
fibroblast of breast
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
hepatic stellate cell
8
kidney glomerular epithelial cell
8
myoepithelial cell of mammary gland
8
pancreatic beta cell
8
renal cortical epithelial cell
8
skeletal muscle satellite cell
8
skin fibroblast
8
smooth muscle cell
7
CD1c-positive myeloid dendritic cell
7
choroid plexus epithelial cell
7
fibroblast
7
kidney epithelial cell
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
naive thymus-derived CD8-positive, alpha-beta T cell
7
pancreatic alpha cell
7
pancreatic delta cell
7
pulmonary artery endothelial cell
6
T-cell
6
alternatively activated macrophage
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
cardiac muscle cell
6
dermis lymphatic vessel endothelial cell
6
erythroblast
6
foreskin melanocyte
6
gamma-delta T cell
6
glutamatergic neuron
6
memory B cell
6
olfactory receptor cell
6
peripheral blood mononuclear cell
6
skeletal muscle cell
6
smooth muscle cell of the brain vasculature
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
T follicular helper cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
brain microvascular endothelial cell
5
central memory CD8-positive, alpha-beta T cell
5
effector memory CD8-positive, alpha-beta T cell
5
fibroblast of peridontal ligament
5
inflammatory macrophage
5
iris pigment epithelial cell
5
kidney capillary endothelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
luminal epithelial cell of mammary gland
5
lung microvascular endothelial cell
5
mesangial cell
5
non-pigmented ciliary epithelial cell
5
pancreatic stellate cell
5
plasma cell
5
tracheal epithelial cell
4
acute myeloid leukemia cell
4
adult endothelial progenitor cell
4
aortic adventitial fibroblast
4
aortic endothelial cell
4
astrocyte of the spinal cord
4
cardiac fibroblast
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
epithelial cell of esophagus
4
fibroblast of gingiva
4
fibroblast of the aortic adventitia
4
fibroblast of the conjunctiva
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
mast cell
4
mature natural killer cell
4
memory T cell
4
memory regulatory T cell
4
mesenchymal stem cell
4
naive B cell
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
preadipocyte
4
renal epithelial cell
4
stromal cell of bone marrow
3
Cycling Mononuclear Phagocyte
3
Ishikawa
3
Mast Cell
3
S-shaped body
3
Th1 cell
3
Th17 cell
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
blood cell
3
bone marrow cell
Organ
1
epithelium
1
stomach
Date released
1
November, 2021
Software used
1
abc
Lab
1
Bing Ren, UCSD
Project
1
ENCODE
RFA
1
ENCODE3
organ_slims!
embryo
annotation_type_category!
snATAC-seq
Showing 1 of 1 results
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Download
FileSet
DSR283LYA
released
Annotation file set
: Target gene predictions of Parietal Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE