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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
2
accessible chromatin
2
chromatin state
2
target gene predictions
1
gene expression
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
27
common myeloid progenitor, CD34-positive
14
B cell
14
CD4-positive, alpha-beta memory T cell
11
foreskin keratinocyte
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
7
CD8-positive, alpha-beta T cell
7
mononuclear cell
7
neurosphere
7
trophoblast cell
6
T-helper 1 cell
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
foreskin fibroblast
6
natural killer cell
5
T-helper 17 cell
5
T-helper 2 cell
5
regulatory T cell
4
T cell
4
T-cell
4
bronchial epithelial cell
4
epithelial cell of prostate
4
fibroblast of breast
4
fibroblast of dermis
4
foreskin melanocyte
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
4
peripheral blood mononuclear cell
4
skeletal muscle myoblast
3
cardiac fibroblast
3
fibroblast of cardiac tissue
3
keratinocyte
3
kidney tubule cell
3
mammary epithelial cell
3
mammary gland epithelial cell
3
naive T cell
2
CD1c-positive myeloid dendritic cell
2
astrocyte
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
astrocyte of the spinal cord
2
brain microvascular endothelial cell
2
cardiac muscle cell
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
fibroblast of gingiva
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
iris pigment epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
non-pigmented ciliary epithelial cell
2
osteoblast
2
pulmonary artery endothelial cell
2
renal cortical epithelial cell
2
retinal pigment epithelial cell
2
skeletal muscle cell
2
skeletal muscle satellite cell
2
skin fibroblast
2
smooth muscle cell of the brain vasculature
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
amnion mesenchymal stem cell
1
amniotic epithelial cell
1
amniotic stem cell
1
brain pericyte
1
effector memory CD4-positive, alpha-beta T cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
hepatic stellate cell
1
hepatocyte
1
kidney capillary endothelial cell
1
luminal epithelial cell of mammary gland
1
mammary stem cell
1
mesenchymal stem cell
1
pericyte cell
1
regular cardiac myocyte
Organ
3
epithelium
3
kidney
Life stage
3
adult
Date released
2
September, 2022
1
February, 2021
Software used
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
lung
bone marrow
Showing 3 of 3 results
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Download
FileSet
DSR417TTX
released
Annotation file set
: Candidate regulatory elements for BSS01103 kidney tubule cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR103NYS
released
Annotation file set
: Candidate regulatory elements for BSS01102 kidney tubule cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR291WRX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE kidney tubule cell
Lab:
AMP-T2D consortium
Project:
AMP