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Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
4
target gene predictions
3
differential activity
3
gene expression
1
variant allelic effects
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
snATAC-seq
Available data
5
bed bed3+
4
bigWig
1
bam
1
bed gappedPeak
1
bigBed narrowPeak
1
xls
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
8
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
6
pancreatic ductal cell
5
pancreatic delta cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
1
islet of Langerhans
Organ
5
epithelium
5
pancreas
Life stage
1
adult
1
unknown
Date released
2
January, 2021
1
February, 2024
1
November, 2021
1
September, 2022
Software used
5
macs
Lab
3
Kyle Gaulton, UCSD
1
AMP-T2D consortium
1
Bing Ren, UCSD
Project
2
AMP
2
T1D
1
ENCODE
RFA
2
AMP
2
T1D
1
ENCODE3
Showing 5 of 5 results
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Download
FileSet
DSR025RWZ
released
Annotation file set
: Accessible chromatin from snATAC-seq of delta cells from human pancreatic islet samples
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR181PDQ
released
Annotation file set
: Accessible chromatin annotation of Pancreatic Delta,Gamma cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR821QOK
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of SSTlow_delta
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR247PPG
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of SSThigh_delta
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR119NFC
released
Annotation file set
: pancreatic delta cell accessible chromatin annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP