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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
16
chromatin state
14
target gene predictions
7
gene expression
3
accessible chromatin
2
histone modifications
1
binding sites
1
eQTL
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
ATAC-seq
3
DNase-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
4
heart
4
pancreas
3
kidney
3
stomach
2
Ammon's horn
2
brain
2
caudate nucleus
2
frontal cortex
2
globus pallidus
2
heart left ventricle
2
medulla oblongata
2
midbrain
2
muscle of leg
2
occipital lobe
2
pancreatic ductal cell
2
pancreatic stellate cell
2
pons
2
putamen
2
renal pelvis
2
retina
2
right atrium auricular region
2
superior temporal gyrus
2
tibial artery
2
tibial nerve
1
hindlimb muscle
1
Peyer's patch
1
Schwann cell
1
adrenal gland
1
ascending aorta
1
breast epithelium
1
cerebellar cortex
1
cerebellum
1
chorion membrane
1
coronary artery
1
cortex of kidney
1
crypt of Lieberkuhn
1
embryonic facial prominence
1
endothelial cell
1
esophagus muscularis mucosa
1
esophagus squamous epithelium
1
eye
1
fetal heart
1
forelimb muscle
1
gastrocnemius medialis
1
glomerular epithelium
1
heart right ventricle
1
inferior parietal cortex
1
islet of Langerhans
1
large intestine
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
limb
1
liver
1
middle frontal gyrus
1
muscle of arm
1
omental fat pad
1
ovary
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
placenta
1
prefrontal cortex
1
prostate gland
1
proximal epiphysis of femur
1
psoas muscle
1
renal cortex interstitium
1
renal cortex tubule
1
right kidney
1
right lung
1
right renal cortex interstitium
1
right renal pelvis
1
sigmoid colon
1
small intestine
1
spinal cord
1
spleen
1
testis
1
thymus
1
thyroid gland
1
tissue-resident macrophage
1
tongue
1
transverse colon
1
trophoblast
1
type B pancreatic cell
1
umbilical cord
1
upper lobe of left lung
1
urinary bladder
1
uterus
Organ
3
kidney
Life stage
2
fetal
Date released
2
January, 2020
1
June, 2020
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type_category!
ATAC-seq
Showing 3 of 3 results
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Download
FileSet
DSR920NWL
released
Annotation file set
: Accessible chromatin annotation for Kidney Fetal kidney from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR151NNQ
released
Annotation file set
: Accessible chromatin annotation of left kidney from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR166VPA
released
Annotation file set
: Accessible chromatin annotation of kidney fetal from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP