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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
16
chromatin state
14
target gene predictions
10
accessible chromatin
7
gene expression
2
histone modifications
1
binding sites
1
eQTL
1
variant allelic effects
Annotation Category
7
Gene expression levels
1
Genetic variant effects
Annotation type Category
8
RNA-seq
Available data
7
tsv
1
bed bed3+
File set status
8
released
Genome assembly (visualization)
1
hg19
Organism
8
Homo sapiens
Biosample type
8
tissue
Biosample term
24
islet of Langerhans
11
subcutaneous adipose tissue
8
kidney
8
liver
7
adipose tissue
4
bone tissue
4
cerebellum
4
frontal cortex
4
omental fat pad
4
putamen
4
right atrium auricular region
4
substantia nigra
4
tibial nerve
3
amygdala
3
anterior cingulate cortex
3
body of pancreas
3
brain
3
caudate nucleus
3
coronary artery
3
heart
3
hypothalamus
3
nucleus accumbens
3
skeletal muscle tissue
3
skin of body
3
tibial artery
3
visceral abdominal adipose tissue
2
Ammon's horn
2
C1 segment of cervical spinal cord
2
adrenal gland
2
ascending aorta
2
blood
2
cartilage tissue
2
cerebellum (Hemisphere)
2
dorsolateral prefrontal cortex
2
gastrocnemius medialis(Muscle - Skeletal)
2
heart left ventricle
2
left ventricle myocardium
2
lung
2
minor salivary gland
2
ovary
2
retina
2
right lobe of liver
2
spleen
2
stomach
2
testis
2
uterus
2
vagina
1
abdominal aorta artery
1
aorta
1
aortic valve
1
bladder
1
breast
1
breast - mammary tissue
1
cerebellar hemisphere
1
cervix - ectocervix
1
cervix - endocervix
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
cortex
1
cortex of kidney
1
diencephalon
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
esophagus
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
esophagus muscularis mucosa
1
fallopian tube
1
heart right ventricle
1
kidney - cortex
1
kidney - medulla
1
layer of hippocampus
1
left cardiac atrium
1
metanephros
1
mitral valve
1
nephron tubule
1
occipital lobe
1
pancreas
1
parietal lobe
1
pituitary
1
pituitary gland
1
placenta
1
prostate
1
prostate gland
1
pulmonary valve
1
renal glomerulus
1
right cardiac atrium
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
small intestine
1
small intestine - terminal Ileum
1
spinal cord
1
synovial joint
1
temporal lobe
1
thyroid
1
thyroid gland
1
transverse colon
1
tricuspid valve
1
whole blood
Disease term
1
chronic kidney disease
1
chronic kidney disease, hypertensive disorder
1
diabetes mellitus, hypertensive disorder
1
diabetic kidney disease, hypertensive disorder
1
hypertensive disorder
Organ
8
kidney
Date released
7
February, 2021
1
August, 2021
Software used
7
r
1
matrix-eQTL
Lab
8
Katalin Susztak, Upenn
Project
8
AMP
RFA
8
AMP2
Showing 8 of 8 results
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Download
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR383IER
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR992NTS
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR576EDR
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for diabetes mellitus/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR860SBJ
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for diabetic kidney disease/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR103OWX
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for control group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR464URP
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for chronic kidney disease/hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR514WID
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for chronic kidney disease group
Lab:
Katalin Susztak, Upenn
Project:
AMP