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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
16
chromatin state
14
target gene predictions
10
accessible chromatin
7
gene expression
2
histone modifications
1
binding sites
1
eQTL
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
0
in vitro differentiated cells
Biosample term
15
neural progenitor cell
6
neuroblastoma cell line
5
T-cell acute lymphoblastic leukemia
4
rhabdomyosarcoma cell
3
brain
3
pancreatic ductal adenocarcinoma
2
B cell
2
colon adenocarcinoma
2
endometriosis
2
esophageal adenocarcinoma
2
kidney
2
liver
2
medulloblastoma cell line
2
neuronal stem cell
2
placenta
2
prostate gland
1
BICR 31
1
Barrett's epithelial cell line
1
Brodmann (1909) area 9
1
CD4-positive helper T cell
1
CD8-Positive T-Lymphocytes
1
Chondroid Chordoma
1
Crypt of Lieberkuhn
1
EAhy 926 cell
1
T-lymphoma cell line
1
Th1 cell
1
Uveal Melanoma
1
adipocyte
1
adipose-derived stem cell
1
amygdala
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
atypical teratoid rhabdoid tumor
1
bed nucleus of stria terminalis
1
breast carcinoma
1
cardiogenic mesoderm
1
cartilage tissue
1
caudate nucleus
1
cerebellum
1
chondroblastoma
1
chronic lymphocytic leukemia
1
chronic myelomonocytic leukemia
1
circle of Willis
1
claustrum of brain
1
colon carcinoma
1
colonic adenoma cell
1
colonic mucosa
1
colorectal adenocarcinoma
1
colorectal cancer
1
colorectal carcinoma
1
corneal epithelium
1
cortex of kidney
1
dentate nucleus
1
diffuse intrinsic pontine glioma
1
diffuse large B-cell lymphoma
1
dorsal lateral geniculate nucleus
1
dura mater
1
embryonic fibroblast
1
embryonic stem cell
1
endometrial stromal cell
1
endometrial stromal tumor
1
endometrioid carcinoma
1
endometrium cancer
1
entorhinal cortex
1
ependymoma
1
epidermal stem cell
1
erythroid progenitor cell
1
fibroblast
1
fibroblast-like synoviocyte
1
first pancreatic bud
1
foreskin keratinocyte
1
foreskin melanocyte
1
frontal pole
1
globus pallidus
1
gyrus rectus
1
hESC cell
1
head and neck squamous cell carcinoma BICR 16
1
head and neck squamous cell carcinoma BICR 6
1
heart
1
heart left ventricle
1
hematopoietic multipotent progenitor cell
1
hepatocellular carcinoma
1
hypothalamus
1
iPS DF 4.7 Cell Line
1
intestinal epithelium
1
islet of Langerhans
1
kidney epithelium
1
large intestine
1
layer of hippocampus
1
locus ceruleus
1
lymphoid progenitor cell
1
mammary gland
1
mammary gland epithelial cell
1
medial dorsal nucleus of thalamus
1
melanoma cell line
1
mesenchymal stem cell
1
mesendoderm
1
mesodermal cell
1
midbrain
1
morula
1
myelencephalon
1
natural killer cell
1
nucleus accumbens
1
nucleus of ventral thalamus
1
occipital lobe
1
osteosarcoma
1
pancreas
1
pancreatic adenocarcinoma
1
pancreatic carcinoma
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary gland
1
pontine tegmentum
1
precentral gyrus
1
precuneus cortex
1
prefrontal cortex
1
pulvinar nucleus
1
putamen
1
raphe nuclei
1
red nucleus
1
respiratory system smooth muscle
1
retina
1
secretory cell
1
septal nuclear complex
1
skeletal muscle tissue
1
skin of forearm
1
skin of prepuce of penis
1
smooth muscle tissue
1
stomach
1
subiculum
1
substantia nigra
1
superior parietal cortex
1
superior temporal gyrus
1
supramarginal gyrus
1
temporal lobe
1
temporal pole
1
testis
1
thalamic complex
1
thymus
1
umbilical cord
1
upper lobe of left lung
1
white matter
Organ
2
kidney
Date released
2
February, 2021
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
organ_slims!
spinal cord
Showing 2 of 2 results
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Download
FileSet
DSR007RUJ
released
Annotation file set
: Histone modifications annotation for Kidney Nephrectomy_sample from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR761JKG
released
Annotation file set
: Histone modifications annotation for Kidney Kidney from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP