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Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
eQTL
1
gene expression
Annotation Category
3
Genetic variant effects
1
Gene expression levels
Annotation type Category
4
RNA-seq
Available data
4
tsv
File set status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
70
heart
66
kidney
64
stomach
55
brain
51
muscle of arm
50
lung
45
small intestine
44
adrenal gland
44
muscle of leg
44
placenta
42
large intestine
41
muscle of back
39
left lung
36
retina
34
right lung
34
thymus
32
liver
32
right kidney
31
renal cortex interstitium
31
renal pelvis
30
islet of Langerhans
27
left kidney
26
heart left ventricle
25
spleen
22
spinal cord
20
adipose tissue
20
pigmented layer of retina
20
tibial nerve
18
body of pancreas
17
caudate nucleus
16
coronary artery
16
pancreas
16
sigmoid colon
15
right atrium auricular region
15
subcutaneous adipose tissue
15
tibial artery
14
heart right ventricle
14
omental fat pad
14
ovary
14
testis
13
ascending aorta
13
gastrocnemius medialis
13
substantia nigra
13
thyroid gland
13
transverse colon
13
upper lobe of left lung
12
cerebellum
12
chorionic villus
12
frontal cortex
12
layer of hippocampus
12
muscle of trunk
12
psoas muscle
12
temporal lobe
11
Peyer's patch
11
endocrine pancreas
11
left cardiac atrium
11
prostate gland
11
putamen
11
skeletal muscle tissue
10
left renal cortex interstitium
10
left renal pelvis
10
right renal pelvis
9
Ammon's horn
9
aorta
9
esophagus squamous epithelium
9
right renal cortex interstitium
9
thoracic aorta
8
angular gyrus
8
breast epithelium
8
colonic mucosa
8
esophagus muscularis mucosa
8
lower leg skin
8
trophoblast
7
chorion membrane
7
cingulate gyrus
7
duodenal mucosa
7
eye
7
globus pallidus
7
midbrain
7
mucosa of rectum
7
occipital lobe
7
parathyroid adenoma
7
right lobe of liver
7
stomach smooth muscle
7
tongue
7
vagina
6
esophagus
6
gastroesophageal sphincter
6
limb
6
muscle layer of colon
6
muscle layer of duodenum
6
right cardiac atrium
6
subcutaneous abdominal adipose tissue
6
superior temporal gyrus
6
urinary bladder
6
uterus
5
amygdala
5
cerebellum (Hemisphere)
5
hypothalamus
5
medulla oblongata
5
middle frontal gyrus
5
nucleus accumbens
5
pons
5
umbilical cord
4
Brodmann (1909) area 46
4
C1 segment of cervical spinal cord
4
anterior cingulate cortex
4
bone tissue
4
cerebellar cortex
4
gastrocnemius medialis(Muscle - Skeletal)
4
germinal matrix
4
left ventricle myocardium
3
amnion
3
cartilage tissue
3
cortex of kidney
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
embryonic facial prominence
3
femur
3
inferior parietal cortex
3
mucosa of stomach
3
prefrontal cortex
3
rectum smooth muscle tissue
3
suprapubic skin
3
visceral abdominal adipose tissue
2
hindlimb muscle
2
muscle of leg
2
arm bone
2
breast carcinoma
2
chorion
2
endometrium cancer
2
fallopian tube
2
first pancreatic bud
2
forelimb muscle
2
germinal center
2
kidney epithelium
2
leg bone
2
mammary gland
2
middle frontal area 46
2
pancreatic ductal cell
2
pancreatic stellate cell
2
placental basal plate
2
respiratory system smooth muscle
2
skeletal muscle
2
skin of body
2
skin of forearm
2
skin of prepuce of penis
2
tissue
1
left kidney
1
omental fat pad
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
Schwann cell
1
anterior parahippocampal gyrus
1
aorta wall
1
aortic valve
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
bladder
1
breast - mammary tissue
1
caput epididymis
1
cardiogenic mesoderm
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
circle of Willis
1
claustrum of brain
1
colon
1
colon - sigmoid
1
colon - transverse
1
corneal epithelium
1
crypt of Lieberkuhn
1
dentate nucleus
1
diencephalon
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
dorsolateral prefrontal cortex
1
dura mater
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
fetal heart
1
frontal pole
1
glomerular epithelium
1
gyrus rectus
1
hindlimb muscle
1
intestinal epithelium
1
kidney - cortex
1
kidney - medulla
1
left leg bone
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulloblastoma
Organ
4
spinal cord
Life stage
4
adult
Date released
3
March, 2020
1
January, 2020
Software used
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
target gene predictions
eQTL
Showing 4 of 4 results
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Download
FileSet
DSR938ZCQ
released
Annotation file set
: Fine-mapping results from DAPG of C1 segment of cervical spinal cord for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR400ANT
released
Annotation file set
: Fine-mapping results from CAVIAR of C1 segment of cervical spinal cord for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR705KIJ
released
Annotation file set
: Fine-mapping results from CaVEMaN of C1 segment of cervical spinal cord for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR072MPX
released
Annotation file set
: Gene expression summary of TPM of brain spinal cord from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP