Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
3
candidate regulatory elements
2
chromatin state
2
eQTL
2
gene expression
2
target gene predictions
1
accessible chromatin
1
histone modifications
Annotation Category
3
cis-regulatory elements
2
Genetic variant effects
Annotation type Category
3
ChIP-seq
3
DNase-seq
2
RNA-seq
Available data
3
bed bed3+
1
tsv
File set status
5
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
41
stomach
37
heart
34
lung
33
muscle of arm
31
brain
30
kidney
30
small intestine
29
adrenal gland
28
muscle of back
27
large intestine
27
muscle of leg
27
placenta
26
left lung
22
right lung
20
liver
20
renal cortex interstitium
20
right kidney
20
thymus
19
renal pelvis
18
left kidney
16
spleen
15
spinal cord
13
islet of Langerhans
12
heart left ventricle
11
adipose tissue
10
sigmoid colon
9
body of pancreas
9
ovary
9
thyroid gland
9
transverse colon
8
chorionic villus
8
gastrocnemius medialis
8
muscle of trunk
8
skeletal muscle tissue
8
subcutaneous adipose tissue
8
substantia nigra
8
testis
8
tibial nerve
7
Peyer's patch
7
caudate nucleus
7
endocrine pancreas
7
layer of hippocampus
7
omental fat pad
7
psoas muscle
7
retina
7
upper lobe of left lung
6
esophagus muscularis mucosa
6
esophagus squamous epithelium
6
heart right ventricle
6
left renal cortex interstitium
6
left renal pelvis
6
lower leg skin
6
pancreas
6
right renal pelvis
5
ascending aorta
5
breast epithelium
5
cerebellum
5
coronary artery
5
esophagus
5
gastroesophageal sphincter
5
parathyroid adenoma
5
prostate gland
5
putamen
5
right atrium auricular region
5
right renal cortex interstitium
5
subcutaneous abdominal adipose tissue
5
temporal lobe
5
tibial artery
5
vagina
4
angular gyrus
4
aorta
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
eye
4
frontal cortex
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
skin of body
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
trophoblast
4
uterus
3
Ammon's horn
3
chorion membrane
3
limb
3
right lobe of liver
3
suprapubic skin
3
urinary bladder
2
Brodmann (1909) area 46
2
amnion
2
amygdala
2
anterior cingulate cortex
2
blood
2
cartilage tissue
2
cerebellar cortex
2
chorion
2
femur
2
germinal matrix
2
globus pallidus
2
hypothalamus
2
left cardiac atrium
2
middle frontal area 46
2
middle frontal gyrus
2
mucosa of stomach
2
nucleus accumbens
2
placental basal plate
2
right cardiac atrium
2
umbilical cord
1
C1 segment of cervical spinal cord
1
abdominal aorta artery
1
arm bone
1
breast
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
embryonic facial prominence
1
esophagus mucosa
1
forelimb muscle
1
gastrocnemius medialis(Muscle - Skeletal)
1
germinal center
1
hindlimb muscle
1
inferior parietal cortex
1
left leg bone
1
left ventricle myocardium
1
leg bone
1
medulla oblongata
1
midbrain
1
minor salivary gland
1
nephron tubule
1
occipital lobe
1
pituitary gland
1
pons
1
rectal smooth muscle tissue
1
rectum smooth muscle tissue
1
renal glomerulus
1
right arm bone
1
superior temporal gyrus
1
synovial joint
1
visceral abdominal adipose tissue
Organ
5
brain
Life stage
4
adult
Date released
2
September, 2022
1
February, 2020
1
February, 2021
1
January, 2022
Software used
2
r
1
encode-ccres
1
gtex_eqtl:V8
1
qTLtools
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR872CEQ
released
Annotation file set
: Candidate regulatory elements for BSS00207 cerebellum from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR159URQ
released
Annotation file set
: Candidate regulatory elements for BSS00206 cerebellum from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR034OJH
released
Annotation file set
: brain cerebellum eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR943EVA
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE cerebellum
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR941KCN
released
Annotation file set
: eQTL of cerebellum for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP