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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
3
chromatin state
3
target gene predictions
1
accessible chromatin
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
3
bed bed9
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
26
heart
26
kidney
26
retina
22
stomach
20
brain
20
pigmented layer of retina
17
muscle of arm
17
muscle of leg
16
lung
16
small intestine
15
adrenal gland
15
placenta
14
large intestine
13
left lung
13
liver
13
muscle of back
12
right lung
12
thymus
11
heart left ventricle
11
renal pelvis
11
right kidney
10
renal cortex interstitium
9
islet of Langerhans
9
left kidney
8
adipose tissue
8
pancreas
8
spinal cord
8
spleen
7
left cardiac atrium
7
tibial nerve
6
caudate nucleus
6
coronary artery
6
heart right ventricle
6
sigmoid colon
6
tibial artery
5
gastrocnemius medialis
5
ovary
5
psoas muscle
5
right atrium auricular region
5
temporal lobe
5
thyroid gland
5
transverse colon
4
Peyer's patch
4
angular gyrus
4
aorta
4
ascending aorta
4
body of pancreas
4
chorion membrane
4
chorionic villus
4
endocrine pancreas
4
frontal cortex
4
layer of hippocampus
4
muscle of trunk
4
omental fat pad
4
testis
4
thoracic aorta
4
upper lobe of left lung
3
Ammon's horn
3
breast epithelium
3
cerebellum
3
cingulate gyrus
3
colonic mucosa
3
duodenal mucosa
3
esophagus muscularis mucosa
3
esophagus squamous epithelium
3
eye
3
globus pallidus
3
left renal cortex interstitium
3
left renal pelvis
3
limb
3
medulla oblongata
3
midbrain
3
mucosa of rectum
3
occipital lobe
3
pons
3
prostate gland
3
putamen
3
right cardiac atrium
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle tissue
3
stomach smooth muscle
3
subcutaneous adipose tissue
3
substantia nigra
3
superior temporal gyrus
3
tongue
3
trophoblast
3
urinary bladder
2
Brodmann (1909) area 46
2
cerebellar cortex
2
embryonic facial prominence
2
esophagus
2
germinal matrix
2
inferior parietal cortex
2
lower leg skin
2
middle frontal gyrus
2
muscle layer of colon
2
muscle layer of duodenum
2
pancreatic ductal cell
2
pancreatic stellate cell
2
parathyroid adenoma
2
rectum smooth muscle tissue
2
umbilical cord
2
uterus
2
vagina
1
hindlimb muscle
1
Schwann cell
1
amnion
1
arm bone
1
cortex of kidney
1
crypt of Lieberkuhn
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
endothelial cell
1
femur
1
fetal heart
1
forelimb muscle
1
gastroesophageal sphincter
1
germinal center
1
glomerular epithelium
1
leg bone
1
mid-frontal lobe
1
mucosa of stomach
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
prefrontal cortex
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
renal cortex tubule
1
right lobe of liver
1
skeletal muscle
1
skin of body
1
subcutaneous abdominal adipose tissue
1
tissue-resident macrophage
1
type B pancreatic cell
Organ
4
extraembryonic component
Life stage
2
embryonic
1
unknown
Date released
3
September, 2022
1
June, 2020
Software used
3
chromhmm
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR265MAQ
released
Annotation file set
: Chromatin states for BSS00212 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR859VFU
released
Annotation file set
: Chromatin states for BSS00211 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR453ZGW
released
Annotation file set
: Chromatin states for BSS00209 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR578HOV
released
Annotation file set
: Accessible chromatin annotation for Others Chorion from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP