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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
1
eQTL
Annotation Category
cis-regulatory elements
2
Target gene links
1
Genetic variant effects
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
RNA-seq
Available data
2
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
32
islet of Langerhans
25
heart
23
kidney
23
stomach
20
brain
20
liver
19
adrenal gland
19
lung
18
small intestine
17
muscle of arm
16
adipose tissue
16
placenta
16
subcutaneous adipose tissue
14
large intestine
14
muscle of leg
14
thymus
13
left lung
13
muscle of back
12
body of pancreas
12
coronary artery
12
tibial nerve
11
heart left ventricle
11
right atrium auricular region
11
right kidney
11
right lung
10
caudate nucleus
10
frontal cortex
10
renal cortex interstitium
10
renal pelvis
10
spleen
10
tibial artery
9
cerebellum
9
left kidney
9
omental fat pad
9
putamen
9
spinal cord
9
substantia nigra
8
ascending aorta
8
ovary
8
psoas muscle
7
Ammon's horn
7
heart right ventricle
7
pancreas
7
sigmoid colon
6
amygdala
6
anterior cingulate cortex
6
cerebellum (Hemisphere)
6
hypothalamus
6
nucleus accumbens
6
retina
6
right lobe of liver
6
skeletal muscle tissue
6
thyroid gland
6
transverse colon
5
C1 segment of cervical spinal cord
5
aorta
5
gastrocnemius medialis
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
muscle of trunk
5
testis
4
bone tissue
4
cartilage tissue
4
chorionic villus
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
esophagus
4
layer of hippocampus
4
skin of body
4
uterus
4
vagina
4
visceral abdominal adipose tissue
3
Peyer's patch
3
breast epithelium
3
chorion membrane
3
dorsolateral prefrontal cortex
3
esophagus muscularis mucosa
3
left cardiac atrium
3
left renal cortex interstitium
3
left renal pelvis
3
occipital lobe
3
prostate gland
3
right cardiac atrium
3
right renal cortex interstitium
3
right renal pelvis
3
temporal lobe
3
thoracic aorta
3
trophoblast
3
upper lobe of left lung
2
muscle of leg
2
Brodmann (1909) area 46
2
angular gyrus
2
blood
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
esophagus squamous epithelium
2
eye
2
globus pallidus
2
limb
2
lower leg skin
2
medulla oblongata
2
midbrain
2
middle frontal gyrus
2
minor salivary gland
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
parathyroid adenoma
2
pons
2
stomach smooth muscle
2
superior temporal gyrus
2
tissue
2
tongue
2
urinary bladder
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
Pancreatic islets
1
abdominal aorta artery
1
amnion
1
aorta wall
1
aortic valve
1
arm bone
1
beige adipocyte
1
bladder
1
bladder (urinary bladder)
1
breast
1
breast - mammary tissue
1
cardiac ventricle
1
cerebellar cortex
1
cerebellar hemisphere
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
cortex
1
cortex of kidney
1
diencephalon
1
embryonic facial prominence
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
fallopian tube
1
femur
1
gastric (mucosa of stomach)
1
gastroesophageal sphincter
1
germinal center
1
germinal matrix
1
inferior parietal cortex
1
kidney - cortex
1
kidney - medulla
1
leg bone
1
metanephros
1
mitral valve
1
mucosa of stomach
1
nephron tubule
1
parietal lobe
1
pituitary
1
pituitary gland
1
prostate
1
pulmonary valve
1
rectum smooth muscle tissue
1
renal glomerulus
1
skeletal muscle
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
small intestine - terminal Ileum
1
synovial joint
1
thyroid
1
tricuspid valve
1
umbilical cord
1
white adipose tissue
1
whole blood
Organ
3
esophagus
3
musculature of body
Life stage
2
adult
Date released
2
September, 2022
1
January, 2022
Software used
2
r
1
qTLtools
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_category!
cis-regulatory elements
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR384AEJ
released
Annotation file set
: Target gene predictions for BSS00322 esophagus muscularis mucosa from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR854MKU
released
Annotation file set
: Target gene predictions for BSS00321 esophagus muscularis mucosa from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR493GNB
released
Annotation file set
: esophagus muscularis eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP