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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
1
eQTL
Annotation Category
3
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
ChIP-seq
3
DNase-seq
1
RNA-seq
Available data
3
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
22
stomach
18
heart
18
lung
17
muscle of arm
15
adrenal gland
15
brain
15
kidney
15
muscle of back
15
small intestine
14
large intestine
14
muscle of leg
13
left lung
13
placenta
11
renal cortex interstitium
11
right lung
10
renal pelvis
10
right kidney
10
spleen
9
islet of Langerhans
9
left kidney
9
thymus
8
spinal cord
7
heart left ventricle
7
liver
5
ovary
5
sigmoid colon
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
testis
5
thyroid gland
5
transverse colon
4
Peyer's patch
4
body of pancreas
4
chorionic villus
4
esophagus muscularis mucosa
4
esophagus squamous epithelium
4
gastrocnemius medialis
4
gastroesophageal sphincter
4
layer of hippocampus
4
left renal cortex interstitium
4
left renal pelvis
4
lower leg skin
4
muscle of trunk
4
pancreas
4
retina
4
right renal pelvis
4
skeletal muscle tissue
4
tibial nerve
4
upper lobe of left lung
3
breast epithelium
3
caudate nucleus
3
endocrine pancreas
3
esophagus
3
heart right ventricle
3
omental fat pad
3
parathyroid adenoma
3
prostate gland
3
psoas muscle
3
putamen
3
right renal cortex interstitium
3
skin of body
3
subcutaneous adipose tissue
3
suprapubic skin
3
temporal lobe
3
uterus
3
vagina
2
adipose tissue
2
angular gyrus
2
aorta
2
ascending aorta
2
cerebellum
2
chorion
2
cingulate gyrus
2
colonic mucosa
2
coronary artery
2
duodenal mucosa
2
eye
2
middle frontal area 46
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
placental basal plate
2
right atrium auricular region
2
stomach smooth muscle
2
thoracic aorta
2
tibial artery
2
tongue
2
trophoblast
1
Ammon's horn
1
abdominal aorta artery
1
amnion
1
amygdala
1
anterior cingulate cortex
1
breast
1
cerebellar cortex
1
cerebellar hemisphere
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
esophagus mucosa
1
femur
1
forelimb muscle
1
frontal cortex
1
germinal matrix
1
globus pallidus
1
hindlimb muscle
1
hypothalamus
1
left cardiac atrium
1
left leg bone
1
limb
1
middle frontal gyrus
1
minor salivary gland
1
mucosa of stomach
1
nucleus accumbens
1
pituitary gland
1
rectal smooth muscle tissue
1
right arm bone
1
right cardiac atrium
1
right lobe of liver
1
umbilical cord
1
urinary bladder
1
visceral abdominal adipose tissue
Organ
4
esophagus
4
musculature of body
Life stage
3
adult
Date released
3
February, 2021
1
January, 2022
Software used
4
r
3
encode-ccres
2
chromhmm
1
macs
1
qTLtools
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR493GNB
released
Annotation file set
: esophagus muscularis eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR056KZG
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE esophagus muscularis mucosa
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR061OOR
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE esophagus muscularis mucosa
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR649JOV
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE esophagus muscularis mucosa
Lab:
AMP-T2D consortium
Project:
AMP