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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
64
stomach
62
heart
51
muscle of arm
49
lung
48
brain
47
kidney
46
small intestine
45
adrenal gland
43
muscle of leg
42
large intestine
42
placenta
41
muscle of back
39
left lung
34
right lung
33
thymus
32
right kidney
31
renal cortex interstitium
31
renal pelvis
27
left kidney
23
spinal cord
23
spleen
22
liver
19
heart left ventricle
17
sigmoid colon
14
adipose tissue
14
body of pancreas
14
gastrocnemius medialis
14
ovary
14
thyroid gland
14
transverse colon
13
muscle of trunk
13
pancreas
13
psoas muscle
12
chorionic villus
12
retina
12
tibial nerve
11
Peyer's patch
11
caudate nucleus
11
endocrine pancreas
11
heart right ventricle
11
testis
11
upper lobe of left lung
10
left renal cortex interstitium
10
left renal pelvis
10
right renal pelvis
9
breast epithelium
9
esophagus squamous epithelium
9
layer of hippocampus
9
right renal cortex interstitium
9
skeletal muscle tissue
8
ascending aorta
8
coronary artery
8
esophagus muscularis mucosa
8
lower leg skin
8
omental fat pad
8
right atrium auricular region
8
tibial artery
7
chorion membrane
7
eye
7
frontal cortex
7
parathyroid adenoma
7
prostate gland
7
substantia nigra
7
temporal lobe
7
tongue
7
trophoblast
6
angular gyrus
6
aorta
6
cerebellum
6
cingulate gyrus
6
colonic mucosa
6
duodenal mucosa
6
esophagus
6
gastroesophageal sphincter
6
globus pallidus
6
limb
6
mucosa of rectum
6
muscle layer of colon
6
muscle layer of duodenum
6
putamen
6
stomach smooth muscle
6
thoracic aorta
6
urinary bladder
6
uterus
6
vagina
5
Ammon's horn
5
left cardiac atrium
5
medulla oblongata
5
midbrain
5
middle frontal gyrus
5
occipital lobe
5
pons
5
subcutaneous abdominal adipose tissue
5
superior temporal gyrus
4
Brodmann (1909) area 46
4
cerebellar cortex
4
umbilical cord
3
amnion
3
embryonic facial prominence
3
femur
3
germinal matrix
3
inferior parietal cortex
3
mucosa of stomach
3
right cardiac atrium
3
right lobe of liver
3
suprapubic skin
2
hindlimb muscle
2
muscle of leg
2
arm bone
2
chorion
2
forelimb muscle
2
germinal center
2
leg bone
2
middle frontal area 46
2
placental basal plate
2
rectum smooth muscle tissue
2
skin of body
2
subcutaneous adipose tissue
1
left kidney
1
omental fat pad
1
beige adipocyte
1
cardiac ventricle
1
cerebellum (Hemisphere)
1
cortex of kidney
1
crypt of Lieberkuhn
1
fetal heart
1
glomerular epithelium
1
hindlimb muscle
1
islet of Langerhans
1
left leg bone
1
prefrontal cortex
1
rectal smooth muscle tissue
1
renal cortex tubule
1
right arm bone
1
white adipose tissue
Organ
3
bone element
3
limb
3
skeleton
Life stage
3
embryonic
Date released
2
September, 2022
1
February, 2021
Software used
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
cartilage tissue
Showing 3 of 3 results
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Download
FileSet
DSR109XPD
released
Annotation file set
: Candidate regulatory elements for BSS00330 femur from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR142LPO
released
Annotation file set
: Target gene predictions for BSS00330 femur from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR499GVD
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE femur
Lab:
AMP-T2D consortium
Project:
AMP