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Schema
Citing CMDGA
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Annotation type
1
candidate regulatory elements
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
43
islet of Langerhans
39
kidney
33
heart
31
retina
29
stomach
28
liver
25
brain
21
subcutaneous adipose tissue
20
adrenal gland
20
lung
20
pigmented layer of retina
19
heart left ventricle
19
muscle of arm
19
muscle of leg
18
large intestine
18
placenta
18
small intestine
16
pancreas
16
spleen
16
tibial nerve
15
coronary artery
15
muscle of back
15
thymus
14
adipose tissue
13
caudate nucleus
13
left lung
13
renal cortex interstitium
13
renal pelvis
13
right atrium auricular region
13
tibial artery
12
body of pancreas
12
omental fat pad
12
putamen
12
right kidney
12
right lung
12
substantia nigra
10
ascending aorta
10
cerebellum
10
frontal cortex
10
heart right ventricle
10
spinal cord
9
Ammon's horn
9
left cardiac atrium
9
left kidney
9
ovary
9
testis
8
prostate gland
8
psoas muscle
8
sigmoid colon
8
temporal lobe
7
amygdala
7
aorta
7
hypothalamus
7
layer of hippocampus
7
nucleus accumbens
7
skeletal muscle tissue
7
thyroid gland
7
transverse colon
7
upper lobe of left lung
6
anterior cingulate cortex
6
cerebellum (Hemisphere)
6
gastrocnemius medialis
6
left renal cortex interstitium
6
left renal pelvis
6
right lobe of liver
6
right renal pelvis
6
subcutaneous abdominal adipose tissue
6
uterus
5
C1 segment of cervical spinal cord
5
Peyer's patch
5
breast epithelium
5
cartilage tissue
5
esophagus muscularis mucosa
5
esophagus squamous epithelium
5
gastrocnemius medialis(Muscle - Skeletal)
5
globus pallidus
5
left ventricle myocardium
5
midbrain
5
muscle of trunk
5
occipital lobe
5
right cardiac atrium
5
right renal cortex interstitium
5
thoracic aorta
5
trophoblast
4
angular gyrus
4
bone tissue
4
chorionic villus
4
colonic mucosa
4
cortex of kidney
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
esophagus
4
gastroesophageal sphincter
4
lower leg skin
4
superior temporal gyrus
4
vagina
4
visceral abdominal adipose tissue
3
cingulate gyrus
3
dorsolateral prefrontal cortex
3
duodenal mucosa
3
endocrine pancreas
3
eye
3
medulla oblongata
3
middle frontal gyrus
3
mucosa of rectum
3
parathyroid adenoma
3
pons
3
prefrontal cortex
3
skin of body
3
stomach smooth muscle
3
suprapubic skin
3
tongue
3
umbilical cord
2
hindlimb muscle
2
muscle of leg
2
blood
2
breast carcinoma
2
cerebellar cortex
2
chorion
2
endometrium cancer
2
fallopian tube
2
first pancreatic bud
2
forelimb muscle
2
germinal matrix
2
kidney epithelium
2
limb
2
mammary gland
2
middle frontal area 46
2
minor salivary gland
2
muscle layer of colon
2
muscle layer of duodenum
2
pancreatic ductal cell
2
pancreatic stellate cell
2
pituitary gland
2
placental basal plate
2
respiratory system smooth muscle
2
skeletal muscle
2
skin of forearm
2
skin of prepuce of penis
2
tissue
2
urinary bladder
1
left kidney
1
omental fat pad
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
Schwann cell
1
abdominal aorta artery
1
amnion
1
anterior parahippocampal gyrus
1
aorta wall
1
aortic valve
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
beige adipocyte
1
bladder
1
bladder (urinary bladder)
1
breast
1
breast - mammary tissue
1
caput epididymis
1
cardiac ventricle
1
cardiogenic mesoderm
1
cerebellar hemisphere
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
chorion membrane
1
circle of Willis
1
claustrum of brain
1
colon
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
corneal epithelium
1
cortex
1
crypt of Lieberkuhn
1
dentate nucleus
1
diencephalon
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
dura mater
1
embryonic facial prominence
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
femur
1
fetal heart
1
frontal pole
1
gastric (mucosa of stomach)
1
glomerular epithelium
1
gyrus rectus
1
hindlimb muscle
1
inferior parietal cortex
Organ
1
bone element
1
limb
1
skeleton
Life stage
1
embryonic
Date released
September, 2022
1
February, 2021
Software used
1
encode-ccres
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
month_released!
September, 2022
Showing 1 of 1 results
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Download
FileSet
DSR499GVD
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE femur
Lab:
AMP-T2D consortium
Project:
AMP