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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
2
accessible chromatin
2
candidate regulatory elements
2
chromatin state
2
eQTL
2
gene expression
2
target gene predictions
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
DNase-seq
2
ChIP-seq
Available data
4
bed bed3+
1
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
43
stomach
42
heart
39
kidney
34
muscle of arm
33
lung
31
brain
30
small intestine
29
adrenal gland
29
muscle of leg
29
retina
28
large intestine
28
muscle of back
27
placenta
26
left lung
23
right lung
21
renal cortex interstitium
21
renal pelvis
21
right kidney
21
thymus
20
pigmented layer of retina
18
left kidney
17
liver
17
spleen
15
spinal cord
14
heart left ventricle
11
sigmoid colon
10
pancreas
9
adipose tissue
9
gastrocnemius medialis
9
ovary
9
thyroid gland
9
tibial nerve
9
transverse colon
8
Peyer's patch
8
body of pancreas
8
chorionic villus
8
muscle of trunk
8
psoas muscle
8
testis
8
upper lobe of left lung
7
caudate nucleus
7
endocrine pancreas
7
esophagus squamous epithelium
7
heart right ventricle
7
left renal cortex interstitium
7
left renal pelvis
7
omental fat pad
7
right renal pelvis
6
breast epithelium
6
coronary artery
6
esophagus muscularis mucosa
6
islet of Langerhans
6
layer of hippocampus
6
lower leg skin
6
right atrium auricular region
6
right renal cortex interstitium
6
skeletal muscle tissue
6
tibial artery
5
ascending aorta
5
eye
5
gastroesophageal sphincter
5
parathyroid adenoma
5
prostate gland
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
temporal lobe
5
thoracic aorta
5
tongue
5
trophoblast
4
Ammon's horn
4
angular gyrus
4
aorta
4
cerebellum
4
chorion membrane
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
esophagus
4
frontal cortex
4
globus pallidus
4
limb
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
putamen
4
stomach smooth muscle
4
subcutaneous adipose tissue
4
urinary bladder
4
uterus
4
vagina
3
cerebellar cortex
3
left cardiac atrium
3
medulla oblongata
3
midbrain
3
middle frontal gyrus
3
occipital lobe
3
pons
3
superior temporal gyrus
3
suprapubic skin
3
umbilical cord
2
Brodmann (1909) area 46
2
amnion
2
chorion
2
embryonic facial prominence
2
femur
2
forelimb muscle
2
germinal matrix
2
inferior parietal cortex
2
middle frontal area 46
2
mucosa of stomach
2
pancreatic ductal cell
2
pancreatic stellate cell
2
placental basal plate
2
right cardiac atrium
2
right lobe of liver
1
hindlimb muscle
1
Schwann cell
1
arm bone
1
cortex of kidney
1
crypt of Lieberkuhn
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
endothelial cell
1
fetal heart
1
germinal center
1
glomerular epithelium
1
hindlimb muscle
1
left leg bone
1
leg bone
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
prefrontal cortex
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
rectal smooth muscle tissue
1
rectum smooth muscle tissue
1
renal cortex tubule
1
right arm bone
1
skin of body
1
tissue-resident macrophage
1
type B pancreatic cell
Organ
4
brain
Life stage
3
adult
Date released
2
September, 2022
1
January, 2020
1
June, 2020
Software used
2
macs
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR637NDW
released
Annotation file set
: Candidate regulatory elements for BSS00371 frontal cortex from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR546RID
released
Annotation file set
: Candidate regulatory elements for BSS00369 frontal cortex from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR744GOP
released
Annotation file set
: Accessible chromatin annotation for Neural Cerebrum frontal OC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR423PZC
released
Annotation file set
: Accessible chromatin annotation of brain frontal cortex from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP