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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
2
accessible chromatin
2
candidate regulatory elements
2
chromatin state
2
eQTL
2
gene expression
2
target gene predictions
1
variant allelic effects
Annotation Category
2
Gene expression levels
2
Target gene links
Annotation type Category
2
ChIP-seq
2
DNase-seq
2
RNA-seq
Available data
2
bed bed3+
2
tsv
File set status
4
released
Genome assembly (visualization)
2
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
23
heart
22
stomach
21
kidney
18
adrenal gland
18
lung
17
brain
17
small intestine
muscle of arm
15
placenta
14
large intestine
14
muscle of leg
14
thymus
13
left lung
13
muscle of back
12
islet of Langerhans
11
adipose tissue
11
liver
11
right lung
10
right kidney
9
left kidney
9
renal cortex interstitium
9
renal pelvis
9
spleen
8
heart left ventricle
8
psoas muscle
8
spinal cord
7
body of pancreas
7
ovary
7
sigmoid colon
6
heart right ventricle
5
aorta
5
gastrocnemius medialis
5
muscle of trunk
5
pancreas
5
subcutaneous adipose tissue
5
thyroid gland
5
tibial nerve
5
transverse colon
4
bone tissue
4
caudate nucleus
4
cerebellum
4
chorionic villus
4
coronary artery
4
endocrine pancreas
4
frontal cortex
4
omental fat pad
4
retina
4
right atrium auricular region
4
skeletal muscle tissue
4
testis
3
Ammon's horn
3
Peyer's patch
3
ascending aorta
3
breast epithelium
3
chorion membrane
3
esophagus
3
layer of hippocampus
3
right cardiac atrium
3
substantia nigra
3
temporal lobe
3
tibial artery
3
trophoblast
3
upper lobe of left lung
3
uterus
3
vagina
2
Brodmann (1909) area 46
2
angular gyrus
2
cingulate gyrus
2
colonic mucosa
2
dorsolateral prefrontal cortex
2
duodenal mucosa
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
left cardiac atrium
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
occipital lobe
2
parathyroid adenoma
2
prostate gland
2
putamen
2
right lobe of liver
2
right renal cortex interstitium
2
right renal pelvis
2
stomach smooth muscle
2
thoracic aorta
2
tongue
2
urinary bladder
2
visceral abdominal adipose tissue
1
C1 segment of cervical spinal cord
1
amnion
1
amygdala
1
anterior cingulate cortex
1
aortic valve
1
arm bone
1
beige adipocyte
1
bladder
1
bladder (urinary bladder)
1
breast - mammary tissue
1
cardiac ventricle
1
cerebellar cortex
1
cerebellum (Hemisphere)
1
cervix - ectocervix
1
cervix - endocervix
1
colon - sigmoid
1
colon - transverse
1
diencephalon
1
embryonic facial prominence
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
fallopian tube
1
femur
1
gastric (mucosa of stomach)
1
gastrocnemius medialis(Muscle - Skeletal)
1
gastroesophageal sphincter
1
germinal center
1
germinal matrix
1
globus pallidus
1
hypothalamus
1
inferior parietal cortex
1
kidney - cortex
1
kidney - medulla
1
left ventricle myocardium
1
leg bone
1
medulla oblongata
1
metanephros
1
midbrain
1
middle frontal gyrus
1
minor salivary gland
1
mitral valve
1
mucosa of stomach
1
nucleus accumbens
1
parietal lobe
1
pituitary
1
pons
1
prostate
1
pulmonary valve
1
rectum smooth muscle tissue
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
skin of body
1
small intestine - terminal Ileum
1
superior temporal gyrus
1
thyroid
1
tricuspid valve
1
umbilical cord
1
white adipose tissue
1
whole blood
Organ
4
brain
Life stage
3
adult
1
fetal
Date released
2
September, 2022
1
February, 2020
1
January, 2020
Software used
4
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
muscle of arm
Showing 4 of 4 results
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Download
FileSet
DSR540WDY
released
Annotation file set
: Target gene predictions for BSS00371 frontal cortex from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR897QIE
released
Annotation file set
: Target gene predictions for BSS00369 frontal cortex from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR295GMV
released
Annotation file set
: Gene expression levels of fetal brain frontal cortex from RNA-seq (ENCODE)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR802YAO
released
Annotation file set
: Gene expression summary of TPM of brain cortex from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP