Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
71
heart
65
muscle of arm
61
brain
56
lung
55
muscle of leg
54
muscle of back
54
placenta
53
large intestine
53
stomach
52
left lung
50
kidney
47
small intestine
44
right lung
42
right kidney
38
renal cortex interstitium
38
thymus
37
renal pelvis
36
left kidney
32
adrenal gland
28
spinal cord
16
chorionic villus
16
muscle of trunk
12
left renal cortex interstitium
12
retina
11
right renal cortex interstitium
10
left renal pelvis
10
right renal pelvis
8
eye
8
heart left ventricle
8
liver
8
tongue
8
trophoblast
7
limb
6
chorion membrane
5
germinal matrix
5
heart right ventricle
5
left cardiac atrium
5
testis
4
amnion
4
femur
4
ovary
4
spleen
4
umbilical cord
3
arm bone
3
embryonic facial prominence
3
leg bone
3
skin of body
3
urinary bladder
2
chorion
2
placental basal plate
1
aorta
1
aortic valve
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
forelimb muscle
1
hindlimb muscle
1
left leg bone
1
mitral valve
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
pulmonary valve
1
right arm bone
1
right cardiac atrium
1
tricuspid valve
Organ
4
spleen
Life stage
26
adult
4
embryonic
3
child
1
young adult
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR574XBF
released
Annotation file set
: Candidate regulatory elements for BSS01625 spleen from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR366ORS
released
Annotation file set
: Target gene predictions for BSS01625 spleen from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR787NXV
released
Annotation file set
: Chromatin states for BSS01625 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR787XQT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE spleen
Lab:
AMP-T2D consortium
Project:
AMP