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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
13
eQTL
11
gene expression
6
accessible chromatin
3
chromatin state
2
Fine-mapped variants
2
binding sites
2
sQTL
2
variant to gene
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
4
brain
4
prostate gland
3
islet of Langerhans
3
kidney
3
liver
3
placenta
2
breast carcinoma
2
cortex of kidney
2
endometrium cancer
2
first pancreatic bud
2
heart
2
kidney epithelium
2
layer of hippocampus
2
mammary gland
2
midbrain
2
pancreas
2
prefrontal cortex
2
respiratory system smooth muscle
2
retina
2
skin of forearm
2
skin of prepuce of penis
2
testis
2
thymus
2
upper lobe of left lung
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
adipose tissue
1
amygdala
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
caput epididymis
1
cardiogenic mesoderm
1
cartilage tissue
1
caudate nucleus
1
cerebellum
1
circle of Willis
1
claustrum of brain
1
colon
1
colonic mucosa
1
corneal epithelium
1
dentate nucleus
1
dorsal lateral geniculate nucleus
1
dura mater
1
endometrium
1
entorhinal cortex
1
epididymis
1
fallopian tube
1
frontal pole
1
globus pallidus
1
gyrus rectus
1
heart left ventricle
1
hypothalamus
1
intestinal epithelium
1
large intestine
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulloblastoma
1
morula
1
myelencephalon
1
nucleus accumbens
1
nucleus of ventral thalamus
1
occipital lobe
1
pancreatic adenocarcinoma
1
pancreatic carcinoma
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary gland
1
pontine tegmentum
1
precentral gyrus
1
precuneus cortex
1
pulvinar nucleus
1
putamen
1
raphe nuclei
1
red nucleus
1
renal connecting tubule
1
septal nuclear complex
1
skeletal muscle tissue
1
smooth muscle tissue
1
spleen
1
stomach
1
subiculum
1
substantia nigra
1
superior parietal cortex
1
superior temporal gyrus
1
supramarginal gyrus
1
temporal lobe
1
temporal pole
1
thalamic complex
1
trophoblast
1
umbilical cord
1
white matter
Organ
3
pancreas
Date released
2
February, 2021
1
March, 2020
Software used
2
macs
1
spp
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR538IPB
released
Annotation file set
: Histone modifications annotation for Pancreas Pancreatic_islets from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR081BPN
released
Annotation file set
: Binding sites annotation for Pancreas Pancreatic_islets from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR883333
released
Annotation file set
: Islet TF binding sites (PDX, MAFB, NKX2.2, NKX6.1, FOXA2)
Lab:
Kyle Gaulton, UCSD
Project:
AMP