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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
16
chromatin state
14
target gene predictions
10
accessible chromatin
7
gene expression
2
histone modifications
1
binding sites
1
eQTL
1
variant allelic effects
Annotation Category
7
Gene expression levels
1
cis-regulatory elements
Annotation type Category
7
RNA-seq
1
ChIP-seq
Available data
7
tsv
1
bed bed3+
File set status
8
released
Genome assembly (visualization)
1
hg19
Organism
8
Homo sapiens
Biosample type
8
tissue
Biosample term
13
islet of Langerhans
8
kidney
5
subcutaneous adipose tissue
4
adipose tissue
4
bone tissue
4
heart
2
body of pancreas
2
brain
2
cerebellum
2
fallopian tube
2
frontal cortex
2
liver
2
omental fat pad
2
prostate gland
2
retina
2
right atrium auricular region
2
spleen
2
testis
2
tibial nerve
2
visceral abdominal adipose tissue
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
adrenal gland
1
amygdala
1
anterior cingulate cortex
1
aorta
1
aortic valve
1
ascending aorta
1
bladder
1
breast - mammary tissue
1
breast carcinoma
1
caput epididymis
1
caudate nucleus
1
cerebellum (Hemisphere)
1
cervix - ectocervix
1
cervix - endocervix
1
colon
1
colon - sigmoid
1
colon - transverse
1
coronary artery
1
cortex of kidney
1
diencephalon
1
dorsolateral prefrontal cortex
1
endometrium
1
endometrium cancer
1
epididymis
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
first pancreatic bud
1
gastrocnemius medialis(Muscle - Skeletal)
1
heart left ventricle
1
heart right ventricle
1
hypothalamus
1
kidney - cortex
1
kidney - medulla
1
kidney epithelium
1
layer of hippocampus
1
left cardiac atrium
1
left ventricle myocardium
1
lung
1
mammary gland
1
medulloblastoma
1
metanephros
1
midbrain
1
minor salivary gland
1
mitral valve
1
nucleus accumbens
1
occipital lobe
1
ovary
1
pancreas
1
parietal lobe
1
pituitary
1
placenta
1
prefrontal cortex
1
prostate
1
pulmonary valve
1
putamen
1
renal connecting tubule
1
respiratory system smooth muscle
1
right cardiac atrium
right lobe of liver
1
skeletal muscle tissue
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
skin of forearm
1
skin of prepuce of penis
1
small intestine - terminal Ileum
1
stomach
1
substantia nigra
1
temporal lobe
1
thymus
1
thyroid
1
tibial artery
1
tricuspid valve
1
trophoblast
1
upper lobe of left lung
1
uterus
1
vagina
1
whole blood
Disease term
1
chronic kidney disease
1
chronic kidney disease, hypertensive disorder
1
diabetes mellitus, hypertensive disorder
1
diabetic kidney disease, hypertensive disorder
1
hypertensive disorder
Organ
8
kidney
Date released
8
February, 2021
Software used
7
r
1
macs
Lab
7
Katalin Susztak, Upenn
1
AMP-T2D consortium
Project
8
AMP
RFA
7
AMP2
1
AMP
biosample_term_name!
right lobe of liver
Showing 8 of 8 results
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Download
FileSet
DSR715ILK
released
Annotation file set
: Binding sites annotation for Kidney Kidney from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR383IER
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR992NTS
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR576EDR
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for diabetes mellitus/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR860SBJ
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for diabetic kidney disease/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR103OWX
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for control group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR464URP
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for chronic kidney disease/hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR514WID
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for chronic kidney disease group
Lab:
Katalin Susztak, Upenn
Project:
AMP