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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
13
candidate regulatory elements
10
target gene predictions
9
chromatin state
7
eQTL
4
accessible chromatin
2
histone modifications
1
binding sites
1
caQTL
1
differential activity
1
gene expression
Annotation Category
5
cis-regulatory elements
Annotation type Category
3
ATAC-seq
1
ChIP-seq
1
DNase-seq
Available data
5
bed bed3+
2
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
24
retina
20
pigmented layer of retina
11
kidney
8
islet of Langerhans
6
heart
6
pancreas
5
liver
3
adipose tissue
3
brain
3
coronary artery
3
heart left ventricle
3
midbrain
3
prostate gland
3
right atrium auricular region
3
spleen
3
stomach
3
tibial artery
3
tibial nerve
2
Ammon's horn
2
caudate nucleus
2
cortex of kidney
2
frontal cortex
2
globus pallidus
2
medulla oblongata
2
muscle of leg
2
occipital lobe
2
omental fat pad
2
pancreatic ductal cell
2
pancreatic stellate cell
2
placenta
2
pons
2
prefrontal cortex
2
putamen
2
renal pelvis
2
subcutaneous adipose tissue
2
superior temporal gyrus
2
testis
2
thymus
2
trophoblast
2
upper lobe of left lung
1
hindlimb muscle
1
Peyer's patch
1
Schwann cell
1
adrenal gland
1
ascending aorta
1
breast carcinoma
1
breast epithelium
1
caput epididymis
1
cerebellar cortex
1
cerebellum
1
chorion membrane
1
colon
1
crypt of Lieberkuhn
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
embryonic facial prominence
1
endometrium
1
endometrium cancer
1
endothelial cell
1
epididymis
1
esophagus muscularis mucosa
1
esophagus squamous epithelium
1
eye
1
fallopian tube
1
fetal heart
1
first pancreatic bud
1
forelimb muscle
1
gastrocnemius medialis
1
glomerular epithelium
1
heart right ventricle
1
inferior parietal cortex
1
kidney epithelium
1
large intestine
1
layer of hippocampus
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
limb
1
mammary gland
1
medulloblastoma
1
middle frontal gyrus
1
muscle of arm
1
ovary
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
psoas muscle
1
renal connecting tubule
1
renal cortex interstitium
1
renal cortex tubule
1
respiratory system smooth muscle
1
right kidney
1
right lung
1
right renal cortex interstitium
1
right renal pelvis
1
sigmoid colon
1
skin of forearm
1
skin of prepuce of penis
1
small intestine
1
spinal cord
1
thoracic aorta
1
thyroid gland
1
tissue-resident macrophage
1
tongue
1
transverse colon
1
type B pancreatic cell
1
umbilical cord
1
urinary bladder
1
uterus
Organ
5
liver
Life stage
1
adult
1
embryonic
Date released
1
February, 2021
1
June, 2020
1
May, 2022
1
November, 2019
1
September, 2018
Software used
5
macs
Lab
4
AMP-T2D consortium
1
Karen Mohlke, UNC
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR303OZW
released
Annotation file set
: Accessible chromatin annotation(consensus peaks) of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR902MFN
released
Annotation file set
: Binding sites annotation for Liver Liver from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR750BPY
released
Annotation file set
: Accessible chromatin annotation for Liver Liver from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR815GWW
released
Annotation file set
: Accessible chromatin annotation of embryonic liver
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR027RWS
released
Annotation file set
: ATAC-seq sites in right lobe of liver for 1 sample from ENCODE
Lab:
AMP-T2D consortium
Project:
AMP