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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
2
chromatin state
2
target gene predictions
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
2
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
41
heart
40
stomach
34
brain
33
lung
32
muscle of arm
32
small intestine
31
adrenal gland
30
kidney
29
muscle of leg
29
placenta
27
large intestine
26
left lung
26
muscle of back
25
thymus
22
right lung
20
right kidney
19
liver
18
left kidney
18
renal cortex interstitium
18
renal pelvis
15
heart left ventricle
15
spinal cord
14
adipose tissue
14
spleen
12
psoas muscle
12
sigmoid colon
10
heart right ventricle
10
ovary
9
body of pancreas
9
gastrocnemius medialis
9
muscle of trunk
9
thyroid gland
9
transverse colon
8
aorta
8
chorionic villus
8
endocrine pancreas
8
pancreas
7
caudate nucleus
7
layer of hippocampus
7
left cardiac atrium
7
temporal lobe
7
tibial nerve
6
Peyer's patch
6
angular gyrus
6
chorion membrane
6
coronary artery
6
retina
6
skeletal muscle tissue
6
testis
6
upper lobe of left lung
5
ascending aorta
5
breast epithelium
5
cingulate gyrus
5
colonic mucosa
5
duodenal mucosa
5
esophagus
5
mucosa of rectum
5
right cardiac atrium
5
stomach smooth muscle
5
substantia nigra
5
thoracic aorta
5
tibial artery
5
trophoblast
4
Brodmann (1909) area 46
4
cerebellum
4
esophagus muscularis mucosa
4
esophagus squamous epithelium
4
eye
4
frontal cortex
4
islet of Langerhans
4
left renal cortex interstitium
4
left renal pelvis
4
limb
4
lower leg skin
4
muscle layer of colon
4
muscle layer of duodenum
4
omental fat pad
4
parathyroid adenoma
4
prostate gland
4
right atrium auricular region
4
right renal cortex interstitium
4
right renal pelvis
4
tongue
4
urinary bladder
4
vagina
3
Ammon's horn
3
germinal matrix
3
rectum smooth muscle tissue
3
uterus
2
amnion
2
arm bone
2
cerebellar cortex
2
embryonic facial prominence
2
femur
2
gastroesophageal sphincter
2
germinal center
2
globus pallidus
2
inferior parietal cortex
2
leg bone
2
medulla oblongata
2
midbrain
2
middle frontal gyrus
2
mucosa of stomach
2
occipital lobe
2
pons
2
putamen
2
right lobe of liver
2
skin of body
2
superior temporal gyrus
2
umbilical cord
1
beige adipocyte
1
bladder (urinary bladder)
1
cardiac ventricle
1
dorsolateral prefrontal cortex
1
gastric (mucosa of stomach)
1
mid-frontal lobe
1
skeletal muscle
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
1
white adipose tissue
Organ
4
intestine
4
small intestine
Life stage
4
adult
Date released
4
September, 2022
Software used
2
chromhmm
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR042YBO
released
Annotation file set
: Target gene predictions for BSS01288 muscle layer of duodenum from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR121CKW
released
Annotation file set
: Target gene predictions for BSS01287 muscle layer of duodenum from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR400CZG
released
Annotation file set
: Chromatin states for BSS01288 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR480OFQ
released
Annotation file set
: Chromatin states for BSS01287 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP