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Schema
Citing CMDGA
Clear Filters
Annotation type
4
chromatin state
Annotation Category
4
cis-regulatory elements
Annotation type Category
16
ChIP-seq
DNase-seq
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed9
File set status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
37
islet of Langerhans
27
heart
27
kidney
25
brain
23
liver
22
stomach
19
lung
18
placenta
17
adrenal gland
17
small intestine
16
muscle of arm
16
subcutaneous adipose tissue
15
adipose tissue
15
muscle of leg
15
thymus
14
large intestine
13
heart left ventricle
13
left lung
13
muscle of back
11
caudate nucleus
11
right lung
11
substantia nigra
11
tibial nerve
10
body of pancreas
10
cerebellum
10
right kidney
10
spleen
9
coronary artery
9
frontal cortex
9
left kidney
9
omental fat pad
9
putamen
9
renal cortex interstitium
9
renal pelvis
9
right atrium auricular region
9
tibial artery
8
ascending aorta
8
heart right ventricle
8
pancreas
8
spinal cord
7
Ammon's horn
7
amygdala
7
aorta
7
hypothalamus
7
layer of hippocampus
7
left cardiac atrium
7
nucleus accumbens
7
ovary
7
prostate gland
7
psoas muscle
7
retina
7
skeletal muscle tissue
7
temporal lobe
7
testis
6
anterior cingulate cortex
6
right lobe of liver
6
sigmoid colon
5
C1 segment of cervical spinal cord
5
cartilage tissue
5
cerebellum (Hemisphere)
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
right cardiac atrium
5
thyroid gland
5
transverse colon
5
upper lobe of left lung
4
angular gyrus
4
bone tissue
4
chorionic villus
4
colonic mucosa
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
esophagus
4
gastrocnemius medialis
4
muscle of trunk
4
skin of body
4
trophoblast
4
vagina
4
visceral abdominal adipose tissue
3
Peyer's patch
3
chorion membrane
3
cingulate gyrus
3
cortex of kidney
3
dorsolateral prefrontal cortex
3
duodenal mucosa
3
esophagus muscularis mucosa
3
midbrain
3
mucosa of rectum
3
occipital lobe
3
stomach smooth muscle
3
thoracic aorta
3
uterus
2
Brodmann (1909) area 46
2
blood
2
breast carcinoma
2
breast epithelium
2
endometrium cancer
2
esophagus squamous epithelium
2
eye
2
fallopian tube
2
first pancreatic bud
2
germinal matrix
2
globus pallidus
2
kidney epithelium
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mammary gland
2
minor salivary gland
2
muscle layer of colon
2
muscle layer of duodenum
2
pancreatic ductal cell
2
pancreatic stellate cell
2
parathyroid adenoma
2
pituitary gland
2
prefrontal cortex
2
rectum smooth muscle tissue
2
respiratory system smooth muscle
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle
2
skin of forearm
2
skin of prepuce of penis
2
superior temporal gyrus
2
tissue
2
tongue
2
umbilical cord
2
urinary bladder
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
Schwann cell
1
abdominal aorta artery
1
amnion
1
anterior parahippocampal gyrus
1
aorta wall
1
aortic valve
1
arcuate nucleus of hypothalamus
1
arm bone
1
bed nucleus of stria terminalis
1
bladder
1
bladder (urinary bladder)
1
breast
1
breast - mammary tissue
1
caput epididymis
1
cardiogenic mesoderm
1
cerebellar cortex
1
cerebellar hemisphere
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
circle of Willis
1
claustrum of brain
1
colon
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
corneal epithelium
1
cortex
1
dentate nucleus
1
diencephalon
1
dorsal lateral geniculate nucleus
1
dura mater
1
embryonic facial prominence
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
femur
1
frontal pole
1
gastric (mucosa of stomach)
1
gastroesophageal sphincter
1
germinal center
1
gyrus rectus
1
inferior parietal cortex
1
intestinal epithelium
1
kidney - cortex
1
kidney - medulla
1
leg bone
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulla oblongata
1
medulloblastoma
1
metanephros
1
mid-frontal lobe
1
middle frontal gyrus
1
mitral valve
1
morula
1
mucosa of stomach
1
myelencephalon
1
nephron tubule
1
nucleus of ventral thalamus
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
Organ
4
musculature of body
Life stage
4
embryonic
Date released
4
September, 2022
Software used
4
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type_category!
ATAC-seq
DNase-seq
Showing 4 of 4 results
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Download
FileSet
DSR880CKC
released
Annotation file set
: Chromatin states for BSS01334 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR378ZUR
released
Annotation file set
: Chromatin states for BSS01333 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR306QNW
released
Annotation file set
: Chromatin states for BSS01332 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR467YLM
released
Annotation file set
: Chromatin states for BSS01331 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP