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Schema
Citing CMDGA
Clear Filters
Annotation type
8
candidate regulatory elements
6
target gene predictions
4
chromatin state
1
accessible chromatin
1
eQTL
1
gene expression
Annotation Category
5
cis-regulatory elements
Annotation type Category
4
ChIP-seq
1
DNase-seq
Available data
4
bed bed9
1
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
4
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
26
heart
26
kidney
26
retina
22
stomach
20
brain
20
pigmented layer of retina
17
muscle of arm
17
muscle of leg
16
lung
16
small intestine
15
adrenal gland
15
placenta
14
large intestine
13
left lung
13
liver
13
muscle of back
12
right lung
12
thymus
11
heart left ventricle
11
renal pelvis
11
right kidney
10
renal cortex interstitium
9
islet of Langerhans
9
left kidney
8
adipose tissue
8
pancreas
8
spinal cord
8
spleen
7
left cardiac atrium
7
tibial nerve
6
caudate nucleus
6
coronary artery
6
heart right ventricle
6
sigmoid colon
6
tibial artery
5
gastrocnemius medialis
5
ovary
5
psoas muscle
5
right atrium auricular region
5
temporal lobe
5
thyroid gland
5
transverse colon
4
Peyer's patch
4
angular gyrus
4
aorta
4
ascending aorta
4
body of pancreas
4
chorion membrane
4
chorionic villus
4
endocrine pancreas
4
frontal cortex
4
layer of hippocampus
4
muscle of trunk
4
omental fat pad
4
testis
4
thoracic aorta
4
upper lobe of left lung
3
Ammon's horn
3
breast epithelium
3
cerebellum
3
cingulate gyrus
3
colonic mucosa
3
duodenal mucosa
3
esophagus muscularis mucosa
3
esophagus squamous epithelium
3
eye
3
globus pallidus
3
left renal cortex interstitium
3
left renal pelvis
3
limb
3
medulla oblongata
3
midbrain
3
mucosa of rectum
3
occipital lobe
3
pons
3
prostate gland
3
putamen
3
right cardiac atrium
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle tissue
3
stomach smooth muscle
3
subcutaneous adipose tissue
3
substantia nigra
3
superior temporal gyrus
3
tongue
3
trophoblast
3
urinary bladder
2
Brodmann (1909) area 46
2
cerebellar cortex
2
embryonic facial prominence
2
esophagus
2
germinal matrix
2
inferior parietal cortex
2
lower leg skin
2
middle frontal gyrus
2
muscle layer of colon
2
muscle layer of duodenum
2
pancreatic ductal cell
2
pancreatic stellate cell
2
parathyroid adenoma
2
rectum smooth muscle tissue
2
umbilical cord
2
uterus
2
vagina
1
hindlimb muscle
1
Schwann cell
1
amnion
1
arm bone
1
cortex of kidney
1
crypt of Lieberkuhn
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
endothelial cell
1
femur
1
fetal heart
1
forelimb muscle
1
gastroesophageal sphincter
1
germinal center
1
glomerular epithelium
1
leg bone
1
mid-frontal lobe
1
mucosa of stomach
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
prefrontal cortex
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
renal cortex tubule
1
right lobe of liver
1
skeletal muscle
1
skin of body
1
subcutaneous abdominal adipose tissue
1
tissue-resident macrophage
1
type B pancreatic cell
Organ
5
gonad
5
ovary
Life stage
3
adult
1
embryonic
Date released
4
September, 2022
1
June, 2020
Software used
4
chromhmm
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR341FQS
released
Annotation file set
: Chromatin states for BSS01403 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR269FHF
released
Annotation file set
: Chromatin states for BSS01402 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR455UGR
released
Annotation file set
: Chromatin states for BSS01401 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR843OMB
released
Annotation file set
: Chromatin states for BSS01399 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR007KDG
released
Annotation file set
: Accessible chromatin annotation for Gonad Ovary from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP