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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
3
eQTL
2
accessible chromatin
2
candidate regulatory elements
1
chromatin state
1
gene expression
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
4
Genetic variant effects
1
Target gene links
Annotation type Category
3
RNA-seq
2
DNase-seq
1
ChIP-seq
Available data
3
tsv
1
bed bed3+
File set status
5
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
22
heart
21
stomach
17
adrenal gland
17
brain
17
lung
17
muscle of arm
17
small intestine
15
kidney
15
placenta
14
large intestine
14
muscle of leg
14
thymus
13
left lung
13
muscle of back
11
right kidney
11
right lung
10
liver
10
renal cortex interstitium
10
renal pelvis
9
adipose tissue
9
body of pancreas
9
heart left ventricle
9
left kidney
8
coronary artery
8
psoas muscle
8
spinal cord
8
spleen
8
tibial nerve
7
caudate nucleus
7
right atrium auricular region
7
sigmoid colon
7
tibial artery
6
ascending aorta
6
frontal cortex
6
heart right ventricle
6
ovary
6
pancreas
5
Ammon's horn
5
cerebellum
5
gastrocnemius medialis
5
muscle of trunk
5
omental fat pad
5
putamen
5
substantia nigra
5
thyroid gland
5
transverse colon
4
aorta
4
cerebellum (Hemisphere)
4
chorionic villus
4
endocrine pancreas
4
islet of Langerhans
4
retina
4
right lobe of liver
4
subcutaneous adipose tissue
3
C1 segment of cervical spinal cord
3
Peyer's patch
3
amygdala
3
anterior cingulate cortex
3
breast epithelium
3
chorion membrane
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
esophagus
3
gastrocnemius medialis(Muscle - Skeletal)
3
hypothalamus
3
layer of hippocampus
3
left renal cortex interstitium
3
left renal pelvis
3
left ventricle myocardium
3
nucleus accumbens
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle tissue
3
testis
3
thoracic aorta
3
trophoblast
3
upper lobe of left lung
2
muscle of leg
2
Brodmann (1909) area 46
2
angular gyrus
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
globus pallidus
2
left cardiac atrium
2
limb
2
lower leg skin
2
medulla oblongata
2
midbrain
2
middle frontal gyrus
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
occipital lobe
2
parathyroid adenoma
2
pons
2
prostate gland
2
right cardiac atrium
2
stomach smooth muscle
2
superior temporal gyrus
2
temporal lobe
2
tongue
2
urinary bladder
2
uterus
2
vagina
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
amnion
1
arm bone
1
beige adipocyte
1
bladder (urinary bladder)
1
cardiac ventricle
1
cerebellar cortex
1
dorsolateral prefrontal cortex
1
embryonic facial prominence
1
femur
1
gastric (mucosa of stomach)
1
gastroesophageal sphincter
1
germinal center
1
germinal matrix
1
inferior parietal cortex
1
leg bone
1
mucosa of stomach
1
rectum smooth muscle tissue
1
skin of body
1
umbilical cord
1
white adipose tissue
Organ
5
brain
Life stage
5
adult
Date released
3
March, 2020
1
May, 2020
1
September, 2022
Software used
1
deltasvm
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR506XLL
released
Annotation file set
: Target gene predictions for BSS01469 putamen from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR061VHE
released
Annotation file set
: Variant allelic effects of putamen ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR926AUX
released
Annotation file set
: Fine-mapping results from DAPG of putamen for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR759VFV
released
Annotation file set
: Fine-mapping results from CAVIAR of putamen for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR055JGM
released
Annotation file set
: Fine-mapping results from CaVEMaN of putamen for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP