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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
3
eQTL
2
accessible chromatin
2
candidate regulatory elements
1
chromatin state
1
gene expression
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
3
Genetic variant effects
2
cis-regulatory elements
Annotation type Category
3
RNA-seq
2
DNase-seq
Available data
3
tsv
2
bed bed3+
1
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
4
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
23
retina
20
pigmented layer of retina
10
kidney
islet of Langerhans
6
coronary artery
6
right atrium auricular region
6
tibial artery
6
tibial nerve
5
Ammon's horn
5
caudate nucleus
5
frontal cortex
5
heart
5
omental fat pad
5
pancreas
5
putamen
5
subcutaneous adipose tissue
4
ascending aorta
4
cerebellum
4
liver
3
C1 segment of cervical spinal cord
3
amygdala
3
anterior cingulate cortex
3
body of pancreas
3
cerebellum (Hemisphere)
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
gastrocnemius medialis(Muscle - Skeletal)
3
heart left ventricle
3
hypothalamus
3
left ventricle myocardium
3
nucleus accumbens
3
right lobe of liver
3
stomach
3
substantia nigra
2
adipose tissue
2
brain
2
globus pallidus
2
medulla oblongata
2
midbrain
2
muscle of leg
2
occipital lobe
2
pancreatic ductal cell
2
pancreatic stellate cell
2
pons
2
renal pelvis
2
spleen
2
superior temporal gyrus
1
hindlimb muscle
1
Peyer's patch
1
Schwann cell
1
adrenal gland
1
breast epithelium
1
cerebellar cortex
1
chorion membrane
1
cortex of kidney
1
crypt of Lieberkuhn
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
embryonic facial prominence
1
endothelial cell
1
esophagus muscularis mucosa
1
esophagus squamous epithelium
1
eye
1
fetal heart
1
forelimb muscle
1
gastrocnemius medialis
1
glomerular epithelium
1
heart right ventricle
1
inferior parietal cortex
1
large intestine
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
limb
1
middle frontal gyrus
1
muscle of arm
1
ovary
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
placenta
1
prefrontal cortex
1
prostate gland
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
psoas muscle
1
renal cortex interstitium
1
renal cortex tubule
1
right kidney
1
right lung
1
right renal cortex interstitium
1
right renal pelvis
1
sigmoid colon
1
small intestine
1
spinal cord
1
testis
1
thoracic aorta
1
thymus
1
thyroid gland
1
tissue-resident macrophage
1
tongue
1
transverse colon
1
trophoblast
1
type B pancreatic cell
1
umbilical cord
1
upper lobe of left lung
1
urinary bladder
1
uterus
Organ
5
brain
Life stage
4
adult
Date released
3
March, 2020
1
January, 2020
1
June, 2020
Software used
2
macs
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
islet of Langerhans
Showing 5 of 5 results
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Download
FileSet
DSR509CLD
released
Annotation file set
: Accessible chromatin annotation for Neural Putamen from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR926AUX
released
Annotation file set
: Fine-mapping results from DAPG of putamen for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR759VFV
released
Annotation file set
: Fine-mapping results from CAVIAR of putamen for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR055JGM
released
Annotation file set
: Fine-mapping results from CaVEMaN of putamen for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR003ZQA
released
Annotation file set
: Accessible chromatin annotation of brain putamen from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP