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Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
3
eQTL
2
accessible chromatin
2
candidate regulatory elements
1
chromatin state
1
gene expression
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
41
stomach
38
heart
33
lung
33
muscle of arm
32
brain
31
kidney
29
small intestine
28
adrenal gland
28
large intestine
28
muscle of back
28
placenta
27
muscle of leg
26
left lung
22
right lung
21
thymus
20
renal cortex interstitium
20
right kidney
19
renal pelvis
18
left kidney
15
liver
15
spleen
14
spinal cord
12
heart left ventricle
10
sigmoid colon
8
body of pancreas
8
chorionic villus
8
gastrocnemius medialis
8
muscle of trunk
8
ovary
8
testis
8
thyroid gland
8
transverse colon
8
upper lobe of left lung
7
Peyer's patch
7
adipose tissue
7
endocrine pancreas
7
layer of hippocampus
7
psoas muscle
7
retina
7
skeletal muscle tissue
6
caudate nucleus
6
esophagus squamous epithelium
6
heart right ventricle
6
left renal cortex interstitium
6
left renal pelvis
6
lower leg skin
6
pancreas
6
prostate gland
6
right renal pelvis
6
substantia nigra
6
temporal lobe
6
tibial nerve
5
breast epithelium
5
colonic mucosa
5
esophagus muscularis mucosa
5
gastroesophageal sphincter
5
omental fat pad
5
parathyroid adenoma
5
right renal cortex interstitium
5
subcutaneous abdominal adipose tissue
4
angular gyrus
4
aorta
4
ascending aorta
4
cerebellum
4
cingulate gyrus
4
duodenal mucosa
4
esophagus
4
eye
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
trophoblast
4
vagina
3
chorion membrane
3
coronary artery
3
globus pallidus
3
limb
3
putamen
3
right atrium auricular region
3
suprapubic skin
3
tibial artery
3
umbilical cord
3
urinary bladder
3
uterus
2
Ammon's horn
2
Brodmann (1909) area 46
2
amnion
2
cerebellar cortex
2
chorion
2
femur
2
frontal cortex
2
germinal matrix
2
left cardiac atrium
2
midbrain
2
middle frontal area 46
2
middle frontal gyrus
2
mucosa of stomach
2
occipital lobe
2
placental basal plate
2
right cardiac atrium
2
right lobe of liver
2
subcutaneous adipose tissue
2
superior temporal gyrus
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
amygdala
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
arm bone
1
bed nucleus of stria terminalis
1
breast carcinoma
1
cardiogenic mesoderm
1
cartilage tissue
1
circle of Willis
1
claustrum of brain
1
corneal epithelium
1
cortex of kidney
1
dentate nucleus
1
dorsal lateral geniculate nucleus
1
dura mater
1
embryonic facial prominence
1
endometrium cancer
1
entorhinal cortex
1
first pancreatic bud
1
forelimb muscle
1
frontal pole
1
germinal center
1
gyrus rectus
1
hindlimb muscle
1
hypothalamus
1
inferior parietal cortex
1
intestinal epithelium
1
islet of Langerhans
1
kidney epithelium
1
left leg bone
1
leg bone
1
locus ceruleus
1
mammary gland
1
medial dorsal nucleus of thalamus
1
medulla oblongata
1
morula
1
myelencephalon
1
nucleus accumbens
1
nucleus of ventral thalamus
1
pancreatic adenocarcinoma
1
pancreatic carcinoma
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary gland
1
pons
1
pontine tegmentum
1
precentral gyrus
1
precuneus cortex
1
prefrontal cortex
1
pulvinar nucleus
1
raphe nuclei
1
rectal smooth muscle tissue
1
rectum smooth muscle tissue
1
red nucleus
1
respiratory system smooth muscle
1
right arm bone
1
septal nuclear complex
1
skin of body
1
skin of forearm
1
skin of prepuce of penis
1
smooth muscle tissue
1
subiculum
1
superior parietal cortex
1
supramarginal gyrus
1
temporal pole
1
thalamic complex
1
white matter
Organ
3
brain
Life stage
2
adult
Date released
2
February, 2021
1
September, 2022
Software used
1
encode-ccres
1
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR916RPZ
released
Annotation file set
: Candidate regulatory elements for BSS01469 putamen from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR370LED
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE putamen
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR510FWG
released
Annotation file set
: Histone modifications annotation for Neural Putamen from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP