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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
18
candidate regulatory elements
12
target gene predictions
11
chromatin state
7
eQTL
5
accessible chromatin
2
histone modifications
1
binding sites
1
caQTL
1
differential activity
1
gene expression
1
variant allelic effects
Annotation Category
5
cis-regulatory elements
Annotation type Category
3
ATAC-seq
2
DNase-seq
Available data
5
bed bed3+
3
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
23
retina
20
pigmented layer of retina
10
kidney
6
islet of Langerhans
5
heart
5
pancreas
4
liver
3
coronary artery
3
heart left ventricle
3
right atrium auricular region
3
stomach
3
tibial artery
3
tibial nerve
2
Ammon's horn
2
adipose tissue
2
brain
2
caudate nucleus
2
frontal cortex
2
globus pallidus
2
medulla oblongata
2
midbrain
2
muscle of leg
2
occipital lobe
2
omental fat pad
2
pancreatic ductal cell
2
pancreatic stellate cell
2
pons
2
putamen
2
renal pelvis
2
spleen
2
subcutaneous adipose tissue
2
superior temporal gyrus
1
hindlimb muscle
1
Peyer's patch
1
Schwann cell
1
adrenal gland
1
ascending aorta
1
breast epithelium
1
cerebellar cortex
1
cerebellum
1
chorion membrane
1
cortex of kidney
1
crypt of Lieberkuhn
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
embryonic facial prominence
1
endothelial cell
1
esophagus muscularis mucosa
1
esophagus squamous epithelium
1
eye
1
fetal heart
1
forelimb muscle
1
gastrocnemius medialis
1
glomerular epithelium
1
heart right ventricle
1
inferior parietal cortex
1
large intestine
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
limb
1
middle frontal gyrus
1
muscle of arm
1
ovary
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
placenta
1
prefrontal cortex
1
prostate gland
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
psoas muscle
1
renal cortex interstitium
1
renal cortex tubule
1
right kidney
1
right lung
1
right renal cortex interstitium
1
right renal pelvis
1
sigmoid colon
1
small intestine
1
spinal cord
1
testis
1
thoracic aorta
1
thymus
1
thyroid gland
1
tissue-resident macrophage
1
tongue
1
transverse colon
1
trophoblast
1
type B pancreatic cell
1
umbilical cord
1
upper lobe of left lung
1
urinary bladder
1
uterus
Organ
4
liver
1
kidney
Life stage
2
embryonic
1
adult
Date released
1
June, 2020
1
May, 2020
1
May, 2022
1
November, 2019
1
September, 2018
Software used
4
macs
Lab
4
AMP-T2D consortium
1
Karen Mohlke, UNC
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR303OZW
released
Annotation file set
: Accessible chromatin annotation(consensus peaks) of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR750BPY
released
Annotation file set
: Accessible chromatin annotation for Liver Liver from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR310MSD
released
Annotation file set
: Accessible chromatin of right renal cortex interstitium ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR815GWW
released
Annotation file set
: Accessible chromatin annotation of embryonic liver
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR027RWS
released
Annotation file set
: ATAC-seq sites in right lobe of liver for 1 sample from ENCODE
Lab:
AMP-T2D consortium
Project:
AMP