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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
15
candidate regulatory elements
8
target gene predictions
6
chromatin state
2
accessible chromatin
1
binding sites
1
eQTL
1
gene expression
Annotation Category
2
cis-regulatory elements
1
Gene expression levels
Annotation type Category
1
ATAC-seq
1
DNase-seq
1
RNA-seq
Available data
2
bed bed3+
1
bigWig
1
tsv
File set status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
24
retina
20
pigmented layer of retina
17
islet of Langerhans
17
kidney
8
heart
7
subcutaneous adipose tissue
5
adipose tissue
5
liver
5
pancreas
5
right atrium auricular region
5
tibial nerve
4
bone tissue
4
coronary artery
4
frontal cortex
4
heart left ventricle
4
omental fat pad
4
stomach
4
tibial artery
3
Ammon's horn
3
brain
3
caudate nucleus
3
cerebellum
3
occipital lobe
3
putamen
3
spleen
2
adrenal gland
2
ascending aorta
2
body of pancreas
2
globus pallidus
2
heart right ventricle
2
left cardiac atrium
2
medulla oblongata
2
midbrain
2
muscle of leg
2
ovary
2
pancreatic ductal cell
2
pancreatic stellate cell
2
pons
2
renal pelvis
2
superior temporal gyrus
2
testis
2
uterus
2
visceral abdominal adipose tissue
1
hindlimb muscle
1
C1 segment of cervical spinal cord
1
Peyer's patch
1
Schwann cell
1
amygdala
1
anterior cingulate cortex
1
aorta
1
aortic valve
1
bladder
1
breast - mammary tissue
1
breast epithelium
1
cerebellar cortex
1
cerebellum (Hemisphere)
1
cervix - ectocervix
1
cervix - endocervix
1
chorion membrane
1
colon - sigmoid
1
colon - transverse
1
cortex of kidney
1
crypt of Lieberkuhn
1
diencephalon
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsolateral prefrontal cortex
1
embryonic facial prominence
1
endothelial cell
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus muscularis mucosa
1
esophagus squamous epithelium
1
eye
1
fallopian tube
1
fetal heart
1
forelimb muscle
1
gastrocnemius medialis
1
gastrocnemius medialis(Muscle - Skeletal)
1
glomerular epithelium
1
hypothalamus
1
inferior parietal cortex
1
kidney - cortex
1
kidney - medulla
1
large intestine
1
left renal cortex interstitium
1
left renal pelvis
1
left ventricle myocardium
1
limb
1
lung
1
metanephros
1
middle frontal gyrus
1
minor salivary gland
1
mitral valve
1
muscle of arm
1
nucleus accumbens
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
parietal lobe
1
pituitary
1
placenta
1
prefrontal cortex
1
prostate
1
prostate gland
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
psoas muscle
1
pulmonary valve
1
renal cortex interstitium
1
renal cortex tubule
1
right cardiac atrium
1
right kidney
1
right lobe of liver
1
right lung
1
right renal cortex interstitium
1
right renal pelvis
1
sigmoid colon
1
skeletal muscle tissue
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
small intestine
1
small intestine - terminal Ileum
1
spinal cord
1
substantia nigra
1
temporal lobe
1
thoracic aorta
1
thymus
1
thyroid
1
thyroid gland
1
tissue-resident macrophage
1
tongue
1
transverse colon
1
tricuspid valve
1
trophoblast
1
type B pancreatic cell
1
umbilical cord
1
upper lobe of left lung
1
urinary bladder
1
vagina
1
whole blood
Organ
3
spleen
Life stage
1
adult
Date released
1
June, 2020
1
March, 2024
1
November, 2019
Software used
2
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR747USS
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Spleen.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR346XCX
released
Annotation file set
: Accessible chromatin annotation for Others Spleen from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR188AUG
released
Annotation file set
: Accessible chromatin annotation of spleen
Lab:
AMP-T2D consortium
Project:
AMP