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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
ChIP-seq
Available data
3
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
25
retina
20
pigmented layer of retina
13
kidney
7
heart
7
liver
7
pancreas
6
brain
6
islet of Langerhans
5
prostate gland
4
heart left ventricle
4
placenta
4
stomach
3
adipose tissue
3
caudate nucleus
3
coronary artery
3
cortex of kidney
3
globus pallidus
3
midbrain
3
occipital lobe
3
prefrontal cortex
3
putamen
3
right atrium auricular region
3
spleen
3
superior temporal gyrus
3
testis
3
thymus
3
tibial artery
3
tibial nerve
3
upper lobe of left lung
2
Ammon's horn
2
breast carcinoma
2
cerebellum
2
endometrium cancer
2
first pancreatic bud
2
frontal cortex
2
kidney epithelium
2
large intestine
2
layer of hippocampus
2
mammary gland
2
muscle of leg
2
omental fat pad
2
pancreatic ductal cell
2
pancreatic stellate cell
2
pons
2
renal pelvis
2
respiratory system smooth muscle
2
skin of forearm
2
skin of prepuce of penis
2
subcutaneous adipose tissue
2
trophoblast
2
umbilical cord
1
hindlimb muscle
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Peyer's patch
1
Schwann cell
1
adrenal gland
1
amygdala
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
ascending aorta
1
bed nucleus of stria terminalis
1
breast epithelium
1
caput epididymis
1
cardiogenic mesoderm
1
cartilage tissue
1
cerebellar cortex
1
chorion membrane
1
circle of Willis
1
claustrum of brain
1
colon
1
colonic mucosa
1
corneal epithelium
1
crypt of Lieberkuhn
1
dentate nucleus
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
dura mater
1
embryonic facial prominence
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
esophagus muscularis mucosa
1
esophagus squamous epithelium
1
eye
1
fallopian tube
1
fetal heart
1
forelimb muscle
1
frontal pole
1
gastrocnemius medialis
1
glomerular epithelium
1
gyrus rectus
1
heart right ventricle
1
hypothalamus
1
inferior parietal cortex
1
intestinal epithelium
1
left cardiac atrium
1
left renal pelvis
1
limb
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulla oblongata
1
medulloblastoma
1
middle frontal gyrus
1
morula
1
muscle of arm
1
myelencephalon
1
nucleus accumbens
1
nucleus of ventral thalamus
1
ovary
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
pancreatic adenocarcinoma
1
pancreatic carcinoma
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary gland
1
pontine tegmentum
1
precentral gyrus
1
precuneus cortex
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
psoas muscle
1
pulvinar nucleus
1
raphe nuclei
1
red nucleus
1
renal connecting tubule
1
renal cortex interstitium
1
renal cortex tubule
1
right lung
1
right renal pelvis
1
septal nuclear complex
1
sigmoid colon
1
skeletal muscle tissue
1
small intestine
1
smooth muscle tissue
1
spinal cord
1
subiculum
1
substantia nigra
1
superior parietal cortex
1
supramarginal gyrus
1
temporal lobe
1
temporal pole
1
thalamic complex
1
thoracic aorta
1
thyroid gland
1
tissue-resident macrophage
1
tongue
1
transverse colon
1
type B pancreatic cell
1
urinary bladder
1
uterus
1
white matter
Life stage
1
adult
Date released
1
February, 2021
1
January, 2020
1
June, 2020
Software used
3
macs
2
r
1
chromhmm
1
deltasvm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
distal epiphysis of tibia
Showing 3 of 3 results
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Download
FileSet
DSR868TQQ
released
Annotation file set
: Histone modifications annotation for Neural Gyrus from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR895WSZ
released
Annotation file set
: Accessible chromatin annotation for Neural Gyrus from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR108LQD
released
Annotation file set
: Accessible chromatin annotation of brain superior temporal gyrus from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP