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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
8
candidate regulatory elements
5
target gene predictions
4
chromatin state
1
accessible chromatin
1
eQTL
Annotation Category
4
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
4
ChIP-seq
1
RNA-seq
Available data
4
bed bed9
File set status
5
released
Genome assembly (visualization)
5
GRCh38
4
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
21
heart
20
brain
20
stomach
17
kidney
17
lung
16
islet of Langerhans
16
liver
16
muscle of arm
16
small intestine
15
adrenal gland
15
muscle of leg
15
placenta
13
large intestine
13
left lung
13
muscle of back
11
right lung
11
thymus
10
adipose tissue
10
right kidney
9
heart left ventricle
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
spinal cord
7
spleen
7
subcutaneous adipose tissue
6
caudate nucleus
6
left cardiac atrium
6
substantia nigra
6
tibial nerve
5
body of pancreas
5
coronary artery
5
heart right ventricle
5
layer of hippocampus
5
ovary
5
sigmoid colon
5
skeletal muscle tissue
5
temporal lobe
5
thyroid gland
5
tibial artery
5
transverse colon
4
angular gyrus
4
aorta
4
ascending aorta
4
cerebellum
4
chorionic villus
4
endocrine pancreas
4
frontal cortex
4
gastrocnemius medialis
4
muscle of trunk
4
omental fat pad
4
pancreas
4
psoas muscle
4
putamen
4
retina
4
right atrium auricular region
4
skin of body
4
testis
3
Peyer's patch
3
chorion membrane
3
cingulate gyrus
3
colonic mucosa
3
duodenal mucosa
3
esophagus
3
esophagus muscularis mucosa
3
mucosa of rectum
3
prostate gland
3
right cardiac atrium
3
stomach smooth muscle
3
thoracic aorta
3
upper lobe of left lung
3
vagina
2
Ammon's horn
2
Brodmann (1909) area 46
2
amygdala
2
anterior cingulate cortex
2
blood
2
breast epithelium
2
cartilage tissue
2
esophagus squamous epithelium
2
eye
2
germinal matrix
2
hypothalamus
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
muscle layer of colon
2
muscle layer of duodenum
2
nucleus accumbens
2
parathyroid adenoma
2
rectum smooth muscle tissue
2
right lobe of liver
2
right renal cortex interstitium
2
right renal pelvis
2
tongue
2
trophoblast
2
urinary bladder
2
uterus
1
C1 segment of cervical spinal cord
1
abdominal aorta artery
1
amnion
1
arm bone
1
breast
1
cerebellar cortex
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
embryonic facial prominence
1
esophagus mucosa
1
femur
1
gastrocnemius medialis(Muscle - Skeletal)
1
gastroesophageal sphincter
1
germinal center
1
globus pallidus
1
inferior parietal cortex
1
left ventricle myocardium
1
leg bone
1
medulla oblongata
1
mid-frontal lobe
1
midbrain
1
middle frontal gyrus
1
minor salivary gland
1
mucosa of stomach
1
nephron tubule
1
occipital lobe
1
pituitary gland
1
pons
1
renal glomerulus
1
skeletal muscle
1
subcutaneous abdominal adipose tissue
1
superior temporal gyrus
1
synovial joint
1
umbilical cord
1
visceral abdominal adipose tissue
Organ
5
thyroid gland
Life stage
4
adult
Date released
4
September, 2022
1
January, 2022
Software used
4
chromhmm
1
qTLtools
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR504JAJ
released
Annotation file set
: Chromatin states for BSS01835 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR322WEB
released
Annotation file set
: Chromatin states for BSS01834 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR368OVH
released
Annotation file set
: Chromatin states for BSS01832 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR097DAL
released
Annotation file set
: Chromatin states for BSS01831 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR782PKI
released
Annotation file set
: thyroid eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP