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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
target gene predictions
2
chromatin state
accessible chromatin
1
binding sites
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
4
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
40
stomach
38
heart
33
lung
33
muscle of arm
30
brain
30
kidney
29
small intestine
28
adrenal gland
28
muscle of back
27
large intestine
27
muscle of leg
27
placenta
26
left lung
22
right lung
21
thymus
20
renal cortex interstitium
20
right kidney
19
renal pelvis
18
left kidney
16
spleen
14
liver
14
spinal cord
11
heart left ventricle
10
sigmoid colon
8
adipose tissue
8
body of pancreas
8
chorionic villus
8
gastrocnemius medialis
8
muscle of trunk
8
ovary
8
testis
8
thyroid gland
8
transverse colon
8
upper lobe of left lung
7
Peyer's patch
7
endocrine pancreas
7
layer of hippocampus
7
psoas muscle
7
retina
6
esophagus squamous epithelium
6
heart right ventricle
6
left renal cortex interstitium
6
left renal pelvis
6
lower leg skin
6
pancreas
6
prostate gland
6
right renal pelvis
6
skeletal muscle tissue
6
tibial nerve
5
breast epithelium
5
caudate nucleus
5
esophagus muscularis mucosa
5
gastroesophageal sphincter
5
omental fat pad
5
parathyroid adenoma
5
right renal cortex interstitium
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
temporal lobe
5
trophoblast
4
angular gyrus
4
aorta
4
ascending aorta
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
esophagus
4
eye
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
vagina
3
cerebellum
3
chorion membrane
3
coronary artery
3
limb
3
right atrium auricular region
3
suprapubic skin
3
tibial artery
3
urinary bladder
3
uterus
2
Ammon's horn
2
Brodmann (1909) area 46
2
amnion
2
cerebellar cortex
2
chorion
2
femur
2
frontal cortex
2
germinal matrix
2
globus pallidus
2
islet of Langerhans
2
left cardiac atrium
2
midbrain
2
middle frontal area 46
2
middle frontal gyrus
2
mucosa of stomach
2
placental basal plate
2
putamen
2
right cardiac atrium
2
right lobe of liver
2
subcutaneous adipose tissue
2
umbilical cord
1
arm bone
1
breast carcinoma
1
caput epididymis
1
colon
1
cortex of kidney
1
embryonic facial prominence
1
endometrium
1
endometrium cancer
1
epididymis
1
fallopian tube
1
first pancreatic bud
1
forelimb muscle
1
germinal center
1
hindlimb muscle
1
inferior parietal cortex
1
kidney epithelium
1
left leg bone
1
leg bone
1
mammary gland
1
medulla oblongata
1
medulloblastoma
1
occipital lobe
1
pons
1
prefrontal cortex
1
rectal smooth muscle tissue
1
rectum smooth muscle tissue
1
renal connecting tubule
1
respiratory system smooth muscle
1
right arm bone
1
skin of body
1
skin of forearm
1
skin of prepuce of penis
1
superior temporal gyrus
Organ
5
embryo
Life stage
4
embryonic
Date released
3
February, 2021
2
September, 2022
Software used
2
encode-ccres
2
r
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
accessible chromatin
Showing 5 of 5 results
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Download
FileSet
DSR071QVH
released
Annotation file set
: Candidate regulatory elements for BSS01860 trophoblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR914NXM
released
Annotation file set
: Candidate regulatory elements for BSS01859 trophoblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR763WSY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE trophoblast
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR559AED
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE trophoblast
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR678UGU
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_derived_trophoblast_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP