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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
0
tissue
Biosample term
88
heart
86
stomach
80
kidney
72
brain
68
lung
66
muscle of arm
64
HeLa-S3
63
small intestine
62
A549
62
adrenal gland
60
placenta
58
muscle of leg
56
large intestine
54
muscle of back
53
H1-hESC
52
left lung
49
liver
48
thymus
45
right lung
43
islet of Langerhans
41
K562
41
right kidney
39
renal cortex interstitium
39
renal pelvis
39
retina
36
left kidney
35
spinal cord
34
spleen
32
heart left ventricle
30
adipose tissue
26
MCF-7
23
body of pancreas
23
sigmoid colon
23
tibial nerve
22
EndoC_BH1
21
caudate nucleus
20
breast cancer cell
20
ovary
20
pancreas
20
pigmented layer of retina
20
psoas muscle
20
subcutaneous adipose tissue
19
HFFc6
18
coronary artery
18
gastrocnemius medialis
18
heart right ventricle
18
substantia nigra
18
thyroid gland
18
transverse colon
17
HepG2
17
muscle of trunk
17
omental fat pad
17
right atrium auricular region
17
testis
16
GM12878
16
H9
16
chorionic villus
16
layer of hippocampus
16
skeletal muscle tissue
16
tibial artery
16
upper lobe of left lung
15
cerebellum
14
ascending aorta
14
endocrine pancreas
14
frontal cortex
14
prostate gland
13
Peyer's patch
13
aorta
13
putamen
13
temporal lobe
12
Ammon's horn
12
lymphoblastoid cell line
12
neuroblastoma cell
11
breast epithelium
11
left renal cortex interstitium
10
22Rv1
10
Rhabdomyosarcoma
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
left cardiac atrium
10
lymphocyte
10
right renal pelvis
10
trophoblast
9
HEK293
9
IMR-90
9
NAMALWA cell
9
SK-N-DZ
9
SK-N-SH
9
colonic mucosa
9
esophagus
9
left renal pelvis
9
liposarcoma
9
parathyroid adenoma
9
right renal cortex interstitium
9
thoracic aorta
9
tongue
9
vagina
8
B-lymphoblastoid cell line
8
GM06990
8
GM12864
8
GM12865
8
GM19240
8
HAP-1
8
HL-60
8
HT-29
8
KARPAS-422 cell
8
MM.1S
8
OCI-LY7
8
PC-9
8
SK-N-MC
8
cingulate gyrus
8
duodenal mucosa
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
pituitary stalk
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CMK
7
Caco-2 cell
7
GM12875
7
GM19238
7
GM19239
7
GM23248
7
Jurkat
7
LHCN-M2
7
LNCaP clone FGC
7
LoVo cell
7
MG63
7
PC-3
7
T47D
7
WERI-Rb-1
7
amygdala
7
angular gyrus
7
chorion membrane
7
endometrium adenocarcinoma
7
eye
7
right lobe of liver
7
stomach smooth muscle
7
uterus
6
Brodmann (1909) area 46
6
Daoy
6
GM08714
6
GM10248
6
GM10266
6
GM12891
6
GM12892
6
GM18507
6
H7-hESC
6
HCT116
6
HUES6
6
HUES8
6
HuH-7
6
KBM-7
6
LNCAP
6
NT2-D1 cell
6
OCI-LY1
6
RPMI8226
6
RWPE1
6
Rh-4 cell
6
SJSA1
6
SW480
6
WI38
6
anterior cingulate cortex
6
diffuse intrinsic pontine glioma
6
globus pallidus
6
hypothalamus
6
iPSC derived cell line
6
induced pluripotent stem cell
6
midbrain
6
mucosa of rectum
6
nucleus accumbens
6
superior temporal gyrus
6
urinary bladder
5
A172
5
A673
5
ACHN
5
C1 segment of cervical spinal cord
5
Caki2
5
Chondroid Chordoma
5
CyT49
5
Ewing sarcoma
5
GM04503
5
GM04504
5
H4
5
HCT-116 cell
5
HK-2 cell
5
HUES64
5
L1-S8
5
M059J
5
NB4
5
OCI-LY3
5
esophageal adenocarcinoma
Date released
2
February, 2021
1
June, 2020
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
variant allelic effects
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR013SDH
released
Annotation file set
: Histone modifications annotation for Pancreas PA-TU-8988S from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR571UUX
released
Annotation file set
: Binding sites annotation for Pancreas PA-TU-8988S from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR008BBT
released
Annotation file set
: Accessible chromatin annotation for Pancreas PA-TU-8988T from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP