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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
0
tissue
Biosample term
90
heart
85
stomach
81
kidney
71
brain
67
lung
67
muscle of arm
64
HeLa-S3
62
A549
62
small intestine
61
adrenal gland
59
placenta
58
muscle of leg
56
large intestine
54
muscle of back
53
H1-hESC
52
left lung
48
liver
48
thymus
45
right lung
42
right kidney
41
K562
41
islet of Langerhans
40
renal cortex interstitium
40
renal pelvis
40
retina
36
left kidney
34
spinal cord
33
heart left ventricle
33
spleen
30
adipose tissue
26
MCF-7
24
body of pancreas
24
tibial nerve
23
EndoC_BH1
23
sigmoid colon
21
caudate nucleus
21
pancreas
20
breast cancer cell
20
coronary artery
20
pigmented layer of retina
20
psoas muscle
20
subcutaneous adipose tissue
19
HFFc6
19
heart right ventricle
19
ovary
18
gastrocnemius medialis
18
right atrium auricular region
18
tibial artery
17
HepG2
17
muscle of trunk
17
omental fat pad
17
thyroid gland
17
transverse colon
16
GM12878
16
H9
16
chorionic villus
16
skeletal muscle tissue
16
testis
16
upper lobe of left lung
15
ascending aorta
15
layer of hippocampus
15
substantia nigra
14
Peyer's patch
14
cerebellum
14
endocrine pancreas
14
frontal cortex
13
aorta
13
temporal lobe
12
Ammon's horn
12
left renal cortex interstitium
12
neuroblastoma cell
12
prostate gland
12
putamen
11
breast epithelium
11
left cardiac atrium
11
left renal pelvis
11
right renal pelvis
10
22Rv1
10
Rhabdomyosarcoma
10
esophagus squamous epithelium
10
gastric cancer cell
10
lymphocyte
10
right renal cortex interstitium
10
thoracic aorta
10
trophoblast
9
HEK293
9
IMR-90
9
NAMALWA cell
9
SK-N-DZ
9
SK-N-SH
9
colonic mucosa
9
liposarcoma
9
parathyroid adenoma
9
tongue
8
B-lymphoblastoid cell line
8
GM06990
8
GM12864
8
GM12865
8
GM19240
8
HAP-1
8
HL-60
8
HT-29
8
KARPAS-422 cell
8
MM.1S
8
OCI-LY7
8
SK-N-MC
8
cingulate gyrus
8
duodenal mucosa
8
esophagus
8
esophagus muscularis mucosa
8
fibroblast cell line
8
globus pallidus
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
pituitary stalk
8
vagina
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CMK
7
Caco-2 cell
7
GM12875
7
GM19238
7
GM19239
7
GM23248
7
Jurkat
7
LHCN-M2
7
LNCaP clone FGC
7
LoVo cell
7
MG63
7
PC-3
7
PC-9
7
T47D
7
WERI-Rb-1
7
angular gyrus
7
chorion membrane
7
endometrium adenocarcinoma
7
eye
7
right lobe of liver
7
stomach smooth muscle
6
Brodmann (1909) area 46
6
Daoy
6
GM08714
6
GM10248
6
GM10266
6
GM12891
6
GM12892
6
GM18507
6
H7-hESC
6
HCT116
6
HUES6
6
HUES8
6
HuH-7
6
KBM-7
6
LNCAP
6
NT2-D1 cell
6
OCI-LY1
6
RPMI8226
6
RWPE1
6
Rh-4 cell
6
SJSA1
6
SW480
6
WI38
6
amygdala
6
diffuse intrinsic pontine glioma
6
hypothalamus
6
induced pluripotent stem cell
6
midbrain
6
middle frontal gyrus
6
mucosa of rectum
6
occipital lobe
6
superior temporal gyrus
6
urinary bladder
5
A172
5
A673
5
ACHN
5
C1 segment of cervical spinal cord
5
Caki2
5
Chondroid Chordoma
5
CyT49
5
Ewing sarcoma
5
GM04503
5
GM04504
5
H4
5
HCT-116 cell
5
HK-2 cell
5
HUES64
5
L1-S8
5
M059J
5
NB4
5
OCI-LY3
5
Panc1
5
esophageal adenocarcinoma
5
lymphoblastoid cell line
5
muscle layer of colon
Date released
2
February, 2021
1
June, 2020
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
January, 2022
Showing 3 of 3 results
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Download
FileSet
DSR304JYV
released
Annotation file set
: Histone modifications annotation for Muscle Myoblasts from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR917XIK
released
Annotation file set
: Binding sites annotation for Muscle Myoblasts from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR262SES
released
Annotation file set
: Accessible chromatin annotation for Muscle Myoblasts from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP