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Schema
Citing CMDGA
Clear Filters
Annotation type
459
chromatin state
459
target gene predictions
458
candidate regulatory elements
26
eQTL
9
gene expression
8
accessible chromatin
3
pQTL
1
sQTL
Annotation Category
8
cis-regulatory elements
Annotation type Category
8
ATAC-seq
Available data
8
bed bed3+
8
bigWig
File set status
8
released
Genome assembly (visualization)
8
GRCh38
8
hg19
Organism
8
Homo sapiens
Biosample type
18
primary cell
10
in vitro differentiated cells
8
tissue
Biosample term
7
kidney
1
islet of Langerhans
Disease term
2
diabetes mellitus,hypertensive disorder
1
chronic kidney disease
1
hypertensive disorder
1
hypertensive disorder, chronic kidney disease
Organ
7
kidney
1
pancreas
Life stage
1
adult
Date released
63
June, 2020
40
January, 2020
25
February, 2023
17
November, 2022
13
February, 2024
9
November, 2019
8
February, 2021
7
August, 2021
7
May, 2020
3
September, 2018
2
October, 2019
1
May, 2021
1
May, 2022
1
September, 2022
Software used
8
macs
Lab
7
Katalin Susztak, Upenn
1
AMP-T2D consortium
Project
8
AMP
RFA
7
AMP2
1
AMP
Showing 8 of 8 results
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Download
FileSet
DSR016ZOX
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR073KQB
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR880LWO
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for diabetes mellitus/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR772HPX
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for diabetic kidney disease/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR307LRO
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for control group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR574ZEL
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for chronic kidney disease/hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR937TUB
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for chronic kidney disease group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
TSTSR507522
released
Annotation file set
: Merged ATAC-seq sites in islets for 23 samples including 4 from Bing Ren at UCSD, 2 from Stephen Parker at UMich, and 17 from Mark McCarthy at Oxford (HP1507 and HP1507UW)
Lab:
AMP-T2D consortium
Project:
AMP