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Schema
Citing CMDGA
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Annotation type
13
candidate regulatory elements
10
target gene predictions
9
chromatin state
7
eQTL
4
accessible chromatin
2
histone modifications
1
binding sites
1
caQTL
1
differential activity
1
gene expression
Annotation Category
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
1
ATAC-seq
1
RNA-seq
Available data
1
bed bed3+
1
tsv
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
2
liver
1
aorta wall
1
coronary artery
1
skeletal muscle
1
subcutaneous adipose tissue
1
visceral abdominal adipose tissue
Disease term
1
coronary artery disease
Organ
2
liver
Life stage
1
adult
Date released
1
February, 2024
1
May, 2022
Software used
1
deseq2
1
eigenmt
1
rasqual
Lab
1
AMP-T2D consortium
1
Karen Mohlke, UNC
Project
2
AMP
RFA
2
AMP
organ_slims!
spinal cord
Showing 2 of 2 results
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Download
FileSet
DSR054IUR
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for liver (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP