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Schema
Citing CMDGA
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Annotation type
2
caQTL
1
accessible chromatin
Annotation Category
2
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
3
ATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
58
hg19
3
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
3
CD4-positive helper T cell
Date released
2
October, 2022
1
February, 2024
Software used
2
matrix-eQTL
1
bedops
1
pepatac
Lab
3
Stephen S. Rich Lab @UVA
Project
1535
AMP
333
ENCODE
3
T1D
RFA
3
T1D
files.file_type!
bam
Showing 3 of 3 results
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FileSet
DSR077VUE
released
Annotation file set
: full cis-caQTL stats for 10 T1D-associated regions
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR578KNM
released
Annotation file set
: nominally significant results from cis-caQTL scan
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR204EGG
released
Annotation file set
: A canonical set of CD4+ T cell peaks
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D