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Schema
Citing CMDGA
Clear Filters
Annotation type
13
candidate regulatory elements
10
target gene predictions
8
chromatin state
7
eQTL
4
accessible chromatin
2
histone modifications
1
binding sites
1
caQTL
1
differential activity
1
gene expression
Annotation Category
8
cis-regulatory elements
Annotation type Category
8
ChIP-seq
Available data
7
bed bed9
bam
1
bed bed3+
1
bigBed bed9
File set status
8
released
Genome assembly (visualization)
8
hg19
7
GRCh38
Organism
8
Homo sapiens
Biosample type
8
tissue
Biosample term
8
liver
2
HepG2
2
hepatocyte
1
HuH-7
1
HuH-7.5
1
hepatic stellate cell
1
right lobe of liver
Organ
8
liver
Life stage
5
adult
2
embryonic
Date released
7
September, 2022
1
August, 2017
Software used
8
chromhmm
Lab
7
AMP-T2D consortium
1
Stephen Parker, UMich
Project
8
AMP
RFA
8
AMP
files.file_type!
bam
Showing 8 of 8 results
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FileSet
DSR130MNF
released
Annotation file set
: Chromatin states for BSS01170 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR772QEV
released
Annotation file set
: Chromatin states for BSS01169 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR909YDO
released
Annotation file set
: Chromatin states for BSS01168 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR119TSM
released
Annotation file set
: Chromatin states for BSS01164 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR460OTG
released
Annotation file set
: Chromatin states for BSS01159 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR524SUA
released
Annotation file set
: Chromatin states for BSS01158 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR830PZL
released
Annotation file set
: Chromatin states for BSS00511 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR027410
released
Annotation file set
: ChromHMM 13-state model for Liver
Lab:
Stephen Parker, UMich
Project:
AMP