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Citing CMDGA
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Annotation type
1
meQTL
Annotation Category
1
Genetic variant effects
Annotation type Category
1
DNA methylation profiling by array assay
Available data
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
1
naive thymus-derived CD4-positive, alpha-beta T cell
Life stage
1
adult
Date released
1
May, 2021
Software used
904
chromhmm
715
r
115
deseq2
111
qTLtools
25
seurat
24
gtex_eqtl:V8
24
gtex_finemapping_eQTL:caveman
24
gtex_finemapping_eQTL:caviar
24
gtex_finemapping_eQTL:dapg
16
deltasvm
13
macs
12
deeptools
12
samtools
12
umitools
9
limix
9
salmon
8
matrix-eQTL
7
fastqtl
5
unknown
4
peer
3
mach2qtl
3
sqtlseeker
2
emmax
1
altius-index
1
bimbam
1
haploview
1
minfi
1
snap
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
files.file_type!
bed bed3+
biosample_term_name!
pancreatic mast cell
Showing 1 of 1 results
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Download
FileSet
DSR135HUG
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 132 individuals.
Lab:
AMP-T2D consortium
Project:
AMP