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Citing CMDGA
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Annotation type
1
chromatin state
1
gene expression
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
RNA-seq
Available data
bed bed3+
1
bed bed9
1
bigWig
1
tsv
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
1
cell line
1
tissue
Biosample term
1
WERI-Rb-1
1
kidney
Disease term
58
chronic kidney disease
57
acute kidney failure
55
Acute kidney failure, unspecified
55
Chronic kidney disease (CKD)
18
lung epithelial-myoepithelial carcinoma
8
Philadelphia-positive myelogenous leukemia
6
large-cell immunoblastic lymphoma
5
breast cancer
5
colorectal adenocarcinoma
5
coronary artery disease
5
neuroblastoma
4
prostate adenocarcinoma
3
acute lymphoblastic leukemia
3
cervical adenocarcinoma
3
endometrium adenocarcinoma
3
glioblastoma
3
hepatocellular carcinoma
3
parathyroid gland clear cell adenoma
2
Burkitt lymphoma
2
acute promyelocytic leukemia
2
breast ductal adenocarcinoma
2
melanoma
2
osteosarcoma
2
plasma cell myeloma
2
renal cell adenocarcinoma
2
squamous cell carcinoma
1
Ewing sarcoma
1
adenoid cystic carcinoma
1
chronic kidney disease, hypertensive disorder
1
clear cell renal carcinoma
1
colon carcinoma
1
colorectal cancer
1
diabetes mellitus, hypertensive disorder
1
diabetic kidney disease, hypertensive disorder
1
fibrosarcoma
1
glioma
1
heart failure
1
hypertensive disorder
1
lung adenocarcinoma
1
lung large cell carcinoma
1
metastatic melanoma
1
pancreatic adenocarcinoma
1
pancreatic ductal adenocarcinoma
1
prostate cancer
1
prostate carcinoma
1
retinoblastoma
1
small cell lung carcinoma
1
testicular embryonal carcinoma
1
type 2 diabetes mellitus
Organ
1
eye
1
kidney
Life stage
1
child
Date released
1
February, 2021
1
September, 2022
Software used
1
chromhmm
1
r
Lab
1
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
2
AMP
RFA
1
AMP
1
AMP2
files.file_type!
bed bed3+
Showing 2 of 2 results
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Download
FileSet
DSR709UAF
released
Annotation file set
: Chromatin states for BSS01890 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR992NTS
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP