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Annotation type
1
eQTL
1
hQTL
1
sQTL
Annotation Category
3
Genetic variant effects
Annotation type Category
2
RNA-seq
1
ChIP-seq
Available data
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
18
monocyte
8
EndoC_BH1
6
embryonic stem cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
neutrophil
2
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
central memory CD8-positive, alpha-beta T cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endothelial cell
2
gamma-delta T cell
2
islet of Langerhans
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
naive B cel
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
regulatory T cell
1
Schwann cell
1
activated pancreatic stellate cell
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cardiomyocytes (cardiac muscle cell)
1
cytotoxic T cell
1
hematopoietic multipotent progenitor cell
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
macrophage
1
mast cell
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
myeloid dendritic cell
1
naive regulatory T cell
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic epsilon cell
1
pancreatic polypeptide-secreting cell
1
quiescent pancreatic stellate cell
1
smooth muscle cell
1
stem cell
Life stage
3
adult
Date released
3
May, 2021
2
September, 2022
1
January, 2022
Software used
3
limix
1
macs
1
sqtlseeker
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
files.file_type!
bed bed3+
organ_slims!
extraembryonic component
Showing 3 of 3 results
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Download
FileSet
DSR661WZX
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR676ZHI
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR792EUZ
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP