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Schema
Citing CMDGA
Clear Filters
Annotation type
3
gene expression
2
chromatin state
2
differential activity
Annotation Category
5
Gene expression levels
2
cis-regulatory elements
Annotation type Category
5
single cell RNA-seq
2
ChIP-seq
Available data
bed bed3+
5
tsv
3
bigWig
2
bed bed9
File set status
7
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
7
Homo sapiens
Biosample type
7
primary cell
Biosample term
5
Lymphatic Endothelial Cell
2
dermis lymphatic vessel endothelial cell
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
1
acute kidney failure
1
chronic kidney disease
Organ
402
epithelium
343
kidney
157
brain
130
connective tissue
118
pancreas
103
vasculature
94
musculature of body
82
heart
81
blood vessel
72
lung
69
limb
61
intestine
55
liver
40
adipose tissue
39
skin of body
37
embryo
37
large intestine
34
extraembryonic component
29
artery
28
bodily fluid
26
blood
26
stomach
20
small intestine
19
bone element
17
placenta
16
adrenal gland
15
prostate gland
14
mammary gland
14
spinal cord
13
gonad
13
ureter
12
esophagus
11
eye
11
nerve
11
thymus
10
penis
8
lymph node
8
spleen
7
lymphatic vessel
7
testis
7
uterus
6
lymphoid tissue
6
mouth
6
ovary
6
thyroid gland
6
vein
4
breast
4
vagina
3
skeleton
3
tongue
3
urinary bladder
2
bone marrow
2
bronchus
2
pituitary gland
1
nose
1
pericardium
Life stage
5
adult
2
unknown
Date released
5
September, 2023
2
September, 2022
Software used
3
r
2
chromhmm
2
deseq2
Lab
5
KPMP
2
AMP-T2D consortium
Project
5
KPMP
2
AMP
RFA
5
KPMP
2
AMP
files.file_type!
bed bed3+
Showing 7 of 7 results
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Download
FileSet
DSR840KPU
released
Annotation file set
: Differential activity annotation of Lymphatic Endothelial Cell between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR737GXW
released
Annotation file set
: Differential activity annotation of Lymphatic Endothelial Cell between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR693ABL
released
Annotation file set
: Gene expression annotation of Lymphatic Endothelial Cell of healthy individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR065GDL
released
Annotation file set
: Gene expression annotation of Lymphatic Endothelial Cell of CKD individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR925JNK
released
Annotation file set
: Gene expression annotation of Lymphatic Endothelial Cell of AKI individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR492AJM
released
Annotation file set
: Chromatin states for BSS00264 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR019ZDM
released
Annotation file set
: Chromatin states for BSS00262 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP