Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
171
eQTL
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
1
other
Annotation Category
4
Genetic variant effects
2
Others
Annotation type Category
3
quantitative proteomics
1
ChIP-seq
Available data
3
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
tissue
1
primary cell
Biosample term
2
cartilage tissue
1
cerebrospinal fluid
1
naive thymus-derived CD4-positive, alpha-beta T cell
Organ
2
connective tissue
1
bodily fluid
Life stage
4
adult
Date released
3
August, 2021
1
May, 2021
Software used
2
fastqtl
2
peer
1
limix
1
macs
1
r
Lab
2
AMP-T2D consortium
2
ITG
Project
2
AMP
2
ITG
RFA
2
AMP
2
ITG
files.file_type!
bed bed9+
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR561OLH
released
Annotation file set
: pQTLs from CSF levels of 1,126 proteins in 133 subjects by performing a genome-wide association analysis of 514,227 SNPs
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR524ZAH
released
Annotation file set
: pQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR651XSZ
released
Annotation file set
: pQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR801ZQH
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP